RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 CCDC168Q8NDH2 2452 aa16.16■□□□□ 0.18
CYSTM1-201ENST00000261811 CHD3Q12873 2000 aaKnown RBP16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 SNTNA6NMZ2 147 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 H3BSA7 217 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 OVOL3O00110 214 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 GPRIN2O60269 458 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 APOC1P02654 83 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 MT-ND5P03915 603 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 SLC2A5P22732 501 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 PTH2RP49190 550 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 ATP5J2P56134 94 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 KLF3P57682 345 aaPredicted RBP16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 RHOUQ7L0Q8 258 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 DPY19L4Q7Z388 723 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 IGFBPL1Q8WX77 278 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 PERPQ96FX8 193 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 SLC29A1Q99808 456 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 CACNG6Q9BXT2 260 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 DYNLRB1Q9NP97 96 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 CENPMQ9NSP4 180 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 ZNF701Q9NV72 531 aaPredicted RBP16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 SLCO1C1Q9NYB5 712 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 DUSP13Q9UII6 198 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 TMEM14AQ9Y6G1 99 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 MYO9AB2RTY4 2548 aa16.15■□□□□ 0.18
CYSTM1-201ENST00000261811 USF3Q68DE3 2245 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 A0A1W2PPW3 197 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 ZNF878C9JN71 531 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 F5H5K5 113 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 H7C417 338 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 MPZL2O60487 215 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 CDKN1AP38936 164 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 PPP1CBP62140 327 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 GRB2P62993 217 aaKnown RBP16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 EFNB1P98172 346 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 LRRC36Q1X8D7 754 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 SWI5Q1ZZU3 235 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 SHEQ5VZ18 495 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 C11orf71Q6IPW1 123 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 LYPD4Q6UWN0 246 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 SLC16A9Q7RTY1 509 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 TIGD4Q8IY51 512 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 GALNT4Q8N4A0 578 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 BBS1Q8NFJ9 593 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 APOBEC3DQ96AK3 386 aaPredicted RBP16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 SLAMF6Q96DU3 332 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 MAP6Q96JE9 813 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 COPS4Q9BT78 406 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 YIPF3Q9GZM5 350 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 MS4A5Q9H3V2 200 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 SP140LQ9H930 580 aa16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 WARS2Q9UGM6 360 aaKnown RBP16.14■□□□□ 0.17
CYSTM1-201ENST00000261811 LYNP07948 512 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 ZNF250P15622 560 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 HSD11B1P28845 292 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 WNT5AP41221 380 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 RPS27P42677 84 aaKnown RBP16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 PPOXP50336 477 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 POU4F2Q12837 409 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 TMED1Q13445 227 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 MEDAGQ5VYS4 303 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 ZNF101Q8IZC7 436 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 THEM6Q8WUY1 208 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 SNX33Q8WV41 574 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 CNN2Q99439 309 aaKnown RBP16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 MNTQ99583 582 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 APOL4Q9BPW4 351 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 MRPL37Q9BZE1 423 aaKnown RBP16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 RAB1BQ9H0U4 201 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 CXXC4Q9H2H0 198 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 DDX28Q9NUL7 540 aaKnown RBP16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 LAMP5Q9UJQ1 280 aa16.13■□□□□ 0.17
CYSTM1-201ENST00000261811 LOC100130705A0A1B0GUX0 176 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 M0R233 179 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 ATP6V1E1P36543 226 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 SLC6A9P48067 706 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 SLC34A1Q06495 639 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 NKPD1Q17RQ9 610 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 MST1LQ2TV78 715 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 AADACL4Q5VUY2 407 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 LPCAT4Q643R3 524 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 KCTD18Q6PI47 426 aaPredicted RBP16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 PRSS57Q6UWY2 283 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 OTOSQ8NHW6 89 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 SLC25A40Q8TBP6 338 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 SLC7A6Q92536 515 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 Q96MT0 163 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 DOK1Q99704 481 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 KCNJ15Q99712 375 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 VRK1Q99986 396 aaPredicted RBP16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 SYT3Q9BQG1 590 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 ABHD6Q9BV23 337 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 FAM118AQ9NWS6 357 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 HAO2Q9NYQ3 351 aa16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.12■□□□□ 0.17
CYSTM1-201ENST00000261811 PRRC2AP48634 2157 aaKnown RBP16.11■□□□□ 0.17
CYSTM1-201ENST00000261811 M0R129 80 aa16.11■□□□□ 0.17
CYSTM1-201ENST00000261811 M0R135 149 aa16.11■□□□□ 0.17
CYSTM1-201ENST00000261811 PHYHO14832 338 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms