RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 MISPQ8IVT2 679 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 C15orf54Q8N8G6 183 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 SLC39A7Q92504 469 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 FAM3DQ96BQ1 224 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 FAHD2AQ96GK7 314 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 CDC6Q99741 560 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ADAT1Q9BUB4 502 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 COPS7AQ9UBW8 275 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ADAM18Q9Y3Q7 739 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 TRBV6-7A0A0A0MS04 114 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 C5orf52A6NGY3 159 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 COLCA2A8K830 154 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 PSMD9O00233 223 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 DOK2O60496 412 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 EIF1BO60739 113 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 S100PP25815 95 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 EIF1P41567 113 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 EGR3Q06889 387 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 SKP2Q13309 424 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 NR0B2Q15466 257 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 NNATQ16517 81 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 BEX5Q5H9J7 111 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 EMC4Q5J8M3 183 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ARHGAP40Q5TG30 622 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF704Q6ZNC4 412 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF600Q6ZNG1 722 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ATG4DQ86TL0 474 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 BIVMQ86UB2 503 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 CDC20BQ86Y33 519 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 BAP18Q8IXM2 172 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 GALNT16Q8N428 558 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF676Q8N7Q3 588 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ZDHHC22Q8N966 263 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 EXD3Q8N9H8 876 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 BOLLQ8N9W6 283 aaKnown RBP9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ZSCAN1Q8NBB4 408 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 OR2G2Q8NGZ5 317 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 PHOSPHO1Q8TCT1 267 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 PAQR8Q8TEZ7 354 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF721Q8TF20 911 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 MITD1Q8WV92 249 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 TMEM106AQ96A25 262 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ADIPOR1Q96A54 375 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 CRB3Q9BUF7 120 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 DUSP23Q9BVJ7 150 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 OR8D2Q9GZM6 311 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 ATG5Q9H1Y0 275 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 OR51M1Q9H341 326 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 SEBOXQ9HB31 216 aaPredicted RBP9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 TREM1Q9NP99 234 aa9.7□□□□□ -0.86
CHRNA1-201ENST00000261007 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 CCDC163A0A0D9SF12 145 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 A0A1B0GVT2 93 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 TMEM72A0PK05 275 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 MEIS3P1A6NDR6 274 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 DDAH2O95865 285 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 HLA-AP01891 365 aaKnown RBP9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 PTAFRP25105 342 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 TACR3P29371 465 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 IL12BP29460 328 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 AKR1C2P52895 323 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 CAPZA1P52907 286 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 AKR1C1Q04828 323 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 HABP2Q14520 560 aaPredicted RBP9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 KCNAB1Q14722 419 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 PRAMEF17Q5VTA0 474 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 FDX2Q6P4F2 183 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 SLC29A4Q7RTT9 530 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 BPIFB2Q8N4F0 458 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 PLPP5Q8NEB5 264 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 OR4A4PQ8NGN8 299 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 OR1L3Q8NH93 324 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 C2CD4CQ8TF44 421 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 SAT2Q96F10 170 aaPredicted RBP9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 PHB2Q99623 299 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 PRRT1Q99946 306 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 NXF5Q9H1B4 397 aaKnown RBP9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 ACKR4Q9NPB9 350 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 SMCO4Q9NRQ5 59 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 RCC2Q9P258 522 aaKnown RBP9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 TINAGQ9UJW2 476 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 HIF3AQ9Y2N7 669 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 C5orf42Q9H799 3197 aa9.69□□□□□ -0.86
CHRNA1-201ENST00000261007 A0A087WV48 116 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 C1orf196B1AJZ1 125 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF736B4DX44 427 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 PHYHO14832 338 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF208O43345 1280 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 CYB5AP00167 134 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 CD14P08571 375 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 ITGA5P08648 1049 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 ZNF806P0C7X5 589 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 CD37P11049 281 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 BCKDHBP21953 392 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 OR1D4P47884 311 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 SNRPEP62304 92 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 ACY1Q03154 408 aa9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 AIMP2Q13155 320 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 SRSF5Q13243 272 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-201ENST00000261007 SQSTM1Q13501 440 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms