RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 IDO2Q6ZQW0 420 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 CATSPERDQ86XM0 798 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 ZNF687Q8N1G0 1237 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 NFAM1Q8NET5 270 aaPredicted RBP14.04□□□□□ -0.16
RFX1-201ENST00000254325 OR2M3Q8NG83 312 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 OR1M1Q8NGA1 313 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 ELMOD3Q96FG2 381 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 SLC6A7Q99884 636 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 TMEM235A6NFC5 223 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 ABHD16AO95870 558 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 CX3CR1P49238 355 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 GSG1Q2KHT4 349 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 ABHD17BQ5VST6 288 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 TMEM81Q6P7N7 255 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 ANGPTL5Q86XS5 388 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 OR51A2Q8NGJ7 313 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 OR4C16Q8NGL9 310 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 ASB5Q8WWX0 329 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 LOXL2Q9Y4K0 774 aa14.04□□□□□ -0.16
RFX1-201ENST00000254325 TSPAN9O75954 239 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 CD3DP04234 171 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 EFNA3P52797 238 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 DLX5P56178 289 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 RALGAPA1Q6GYQ0 2036 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 LCN10Q6JVE6 187 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 FAM198BQ6UWH4 519 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 NPAS1Q99742 590 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 SELENOIQ9C0D9 397 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 ARRDC1-AS1Q9H2J1 176 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 TRANK1O15050 2925 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 FREM3P0C091 2139 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 IGLV3-12A0A075B6K2 115 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 STK17BO94768 372 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 APOC1P02654 83 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 CSTBP04080 98 aaKnown RBP14.03□□□□□ -0.16
RFX1-201ENST00000254325 DEGS2Q6QHC5 323 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 RAB11FIP2Q7L804 512 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 TRAPPC6BQ86SZ2 158 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 OR5D18Q8NGL1 313 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 SPTSSAQ969W0 71 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 GPR84Q9NQS5 396 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 CDH23Q9H251 3354 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 TMEM272A0A1B0GTI8 110 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 A0A1B0GW55 424 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 SLC22A5O76082 557 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 DUX4L2P0CJ85 424 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 DUX4L3P0CJ86 424 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 DUX4L4P0CJ87 422 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 DUX4L5P0CJ88 424 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 DUX4L6P0CJ89 424 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 DUX4L7P0CJ90 424 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 POU3F2P20265 443 aaPredicted RBP14.03□□□□□ -0.16
RFX1-201ENST00000254325 EFNB2P52799 333 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 RPS18P62269 152 aaKnown RBP14.03□□□□□ -0.16
RFX1-201ENST00000254325 ZP4Q12836 540 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 KIF26BQ2KJY2 2108 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 C6orf15Q6UXA7 325 aaPredicted RBP14.03□□□□□ -0.16
RFX1-201ENST00000254325 KCTD9Q7L273 389 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 LRRTM1Q86UE6 522 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 HGDQ93099 445 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 MFRPQ9BY79 579 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 DUX4Q9UBX2 424 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 RAB22AQ9UL26 194 aa14.03□□□□□ -0.16
RFX1-201ENST00000254325 LRRC37A5PQ49AS3 106 aa14.02□□□□□ -0.16
RFX1-201ENST00000254325 PEG10Q86TG7 708 aaKnown RBP14.02□□□□□ -0.16
RFX1-201ENST00000254325 OR6S1Q8NH40 331 aa14.02□□□□□ -0.16
RFX1-201ENST00000254325 PTTG3PQ9NZH4 202 aa14.02□□□□□ -0.16
RFX1-201ENST00000254325 SLC5A6Q9Y289 635 aa14.02□□□□□ -0.16
RFX1-201ENST00000254325 MRPS28Q9Y2Q9 187 aaKnown RBP14.02□□□□□ -0.16
RFX1-201ENST00000254325 RER1O15258 196 aa14.02□□□□□ -0.16
RFX1-201ENST00000254325 LPLP06858 475 aa14.02□□□□□ -0.16
RFX1-201ENST00000254325 CCNOP22674 350 aa14.02□□□□□ -0.16
RFX1-201ENST00000254325 DMRTC1Q5HYR2 192 aa14.02□□□□□ -0.16
RFX1-201ENST00000254325 IL22RA1Q8N6P7 574 aa14.02□□□□□ -0.16
RFX1-201ENST00000254325 OR2Y1Q8NGV0 311 aa14.02□□□□□ -0.16
RFX1-201ENST00000254325 SEMA5BQ9P283 1151 aa14.02□□□□□ -0.16
RFX1-201ENST00000254325 ATG2AQ2TAZ0 1938 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 A0A087WZY1 265 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 H7C417 338 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 NPIPB7O75200 414 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 LCATP04180 440 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 NUP62P37198 522 aaPredicted RBP14.02□□□□□ -0.17
RFX1-201ENST00000254325 FOXK1P85037 733 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 ROM1Q03395 351 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 MCHR2Q969V1 340 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 WDR54Q9H977 334 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 EMC3Q9P0I2 261 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 MTFP1Q9UDX5 166 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 B3GALT1Q9Y5Z6 326 aa14.02□□□□□ -0.17
RFX1-201ENST00000254325 ANKRD20A5PA0PJZ0 165 aa14.01□□□□□ -0.17
RFX1-201ENST00000254325 C5orf51A6NDU8 294 aa14.01□□□□□ -0.17
RFX1-201ENST00000254325 ARPC5O15511 151 aa14.01□□□□□ -0.17
RFX1-201ENST00000254325 AQP8O94778 261 aa14.01□□□□□ -0.17
RFX1-201ENST00000254325 CCL3P10147 92 aa14.01□□□□□ -0.17
RFX1-201ENST00000254325 MSR1P21757 451 aa14.01□□□□□ -0.17
RFX1-201ENST00000254325 CARD18P57730 90 aa14.01□□□□□ -0.17
RFX1-201ENST00000254325 ZNF121P58317 390 aaPredicted RBP14.01□□□□□ -0.17
RFX1-201ENST00000254325 IFITM2Q01629 132 aa14.01□□□□□ -0.17
RFX1-201ENST00000254325 SCMH1Q96GD3 660 aa14.01□□□□□ -0.17
RFX1-201ENST00000254325 CST11Q9H112 138 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms