RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 TVP23AA6NH52 213 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 HMGN1P05114 100 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 GYPBP06028 91 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 GIFP27352 417 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 NR4A2P43354 598 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 CDK5Q00535 292 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 PCGF3Q3KNV8 242 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 TMEM255AQ5JRV8 349 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 TMEM154Q6P9G4 183 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 PARP8Q8N3A8 854 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 ZNF540Q8NDQ6 660 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 PITX2Q99697 317 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 ATF6BQ99941 703 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 SLC25A19Q9HC21 320 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 PNRC2Q9NPJ4 139 aaKnown RBP21.43■■□□□ 1.02
LSM7-201ENST00000252622 PAPOLBQ9NRJ5 636 aaKnown RBP21.43■■□□□ 1.02
LSM7-201ENST00000252622 NKIRAS2Q9NYR9 191 aa21.43■■□□□ 1.02
LSM7-201ENST00000252622 HPXP02790 462 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 CLUP10909 449 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 PAICSP22234 425 aaKnown RBP21.42■■□□□ 1.02
LSM7-201ENST00000252622 DAPP51397 102 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 MMP15P51511 669 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 MRPS11P82912 194 aaKnown RBP21.42■■□□□ 1.02
LSM7-201ENST00000252622 PCK2Q16822 640 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 LINC01590Q5TEZ4 76 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 LYPD4Q6UWN0 246 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 MAP6Q96JE9 813 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 GABARAPL1Q9H0R8 117 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 POFUT1Q9H488 388 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 CYSLTR2Q9NS75 346 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 STARD10Q9Y365 291 aa21.42■■□□□ 1.02
LSM7-201ENST00000252622 SURF4O15260 269 aa21.41■■□□□ 1.02
LSM7-201ENST00000252622 NCR1O76036 304 aa21.41■■□□□ 1.02
LSM7-201ENST00000252622 USF1P22415 310 aaPredicted RBP21.41■■□□□ 1.02
LSM7-201ENST00000252622 LIPAP38571 399 aa21.41■■□□□ 1.02
LSM7-201ENST00000252622 ENTPD1P49961 510 aa21.41■■□□□ 1.02
LSM7-201ENST00000252622 ACTR3P61158 418 aa21.41■■□□□ 1.02
LSM7-201ENST00000252622 TEX30Q5JUR7 227 aa21.41■■□□□ 1.02
LSM7-201ENST00000252622 Q71RC1 249 aaPredicted RBP21.41■■□□□ 1.02
LSM7-201ENST00000252622 OR6K6Q8NGW6 343 aa21.41■■□□□ 1.02
LSM7-201ENST00000252622 APOBEC3DQ96AK3 386 aaPredicted RBP21.41■■□□□ 1.02
LSM7-201ENST00000252622 HCAR1Q9BXC0 346 aa21.41■■□□□ 1.02
LSM7-201ENST00000252622 TEX12Q9BXU0 123 aa21.41■■□□□ 1.02
LSM7-201ENST00000252622 WDR76Q9H967 626 aa21.41■■□□□ 1.02
LSM7-201ENST00000252622 CSPG4Q6UVK1 2322 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 CHD3Q12873 2000 aaKnown RBP21.4■■□□□ 1.02
LSM7-201ENST00000252622 PLSCR5A0PG75 271 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 FAM183AA6NL82 134 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 G3V2T6 193 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 RPS27P42677 84 aaKnown RBP21.4■■□□□ 1.02
LSM7-201ENST00000252622 MAGEB1P43366 347 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 ZNF81P51508 661 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 CRISP1P54107 249 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 PSG7Q13046 419 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 RSPO1Q2MKA7 263 aaPredicted RBP21.4■■□□□ 1.02
LSM7-201ENST00000252622 ZDHHC13Q8IUH4 622 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 ZNF511Q8NB15 262 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 LRTOMTQ8WZ04 291 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 GTF3AQ92664 365 aaKnown RBP21.4■■□□□ 1.02
LSM7-201ENST00000252622 RDH5Q92781 318 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 BPESC1Q9GZL8 116 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 MED20Q9H944 212 aa21.4■■□□□ 1.02
LSM7-201ENST00000252622 DDX28Q9NUL7 540 aaKnown RBP21.4■■□□□ 1.02
LSM7-201ENST00000252622 ADH4P08319 380 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 SPARCP09486 303 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 PSKH1P11801 424 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 ZNF23P17027 643 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 KITLGP21583 273 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 ACHEP22303 614 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 RIN1Q13671 783 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 TMEM249Q2WGJ8 235 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 ZMAT1Q5H9K5 638 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 COLCA1Q6ZS62 124 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 AMIGO2Q86SJ2 522 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 OR5L1Q8NGL2 311 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 OR10S1Q8NGN2 331 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 PTP4A1Q93096 173 aa21.39■■□□□ 1.01
LSM7-201ENST00000252622 NSD1Q96L73 2696 aaPredicted RBP21.39■■□□□ 1.01
LSM7-201ENST00000252622 SETD2Q9BYW2 2564 aaPredicted RBP21.38■■□□□ 1.01
LSM7-201ENST00000252622 ZSCAN5BA6NJL1 495 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 PRR23D1E9PI22 279 aaPredicted RBP21.38■■□□□ 1.01
LSM7-201ENST00000252622 GLCEO94923 617 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 ACSM4P0C7M7 580 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 PRR23D2P0DMB1 279 aaPredicted RBP21.38■■□□□ 1.01
LSM7-201ENST00000252622 ESRRGP62508 458 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 GGTLC2Q14390 218 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 FAM209AQ5JX71 171 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 FBXW12Q6X9E4 464 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 DCXRQ7Z4W1 244 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 OTULINQ96BN8 352 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 CENPNQ96H22 339 aaPredicted RBP21.38■■□□□ 1.01
LSM7-201ENST00000252622 C1QTNF5Q9BXJ0 243 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 MARCH7Q9H992 704 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 CHODLQ9H9P2 273 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 KRT84Q9NSB2 600 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 PURGQ9UJV8 347 aaKnown RBP21.38■■□□□ 1.01
LSM7-201ENST00000252622 TLN2Q9Y4G6 2542 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 ZFHX3Q15911 3703 aa21.38■■□□□ 1.01
LSM7-201ENST00000252622 F5H5K5 113 aa21.37■■□□□ 1.01
LSM7-201ENST00000252622 LYNX1G3V0Z9 82 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms