RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.02
VPS50-201ENST00000251739 FSTL3O95633 263 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 SBK2P0C263 348 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 PPIAL4GP0DN37 164 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 RAC2P15153 192 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 MDH2P40926 338 aaKnown RBP8.65□□□□□ -1.02
VPS50-201ENST00000251739 GUCA1AP43080 201 aaPredicted RBP8.65□□□□□ -1.02
VPS50-201ENST00000251739 GPR4P46093 362 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 YAP1P46937 504 aaKnown RBP8.65□□□□□ -1.02
VPS50-201ENST00000251739 FXYD6P3P58550 94 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 LSM6P62312 80 aaKnown RBP8.65□□□□□ -1.02
VPS50-201ENST00000251739 HIST1H3AP68431 136 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 PAX8Q06710 450 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 KCNMB1Q16558 191 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 ZBED5Q49AG3 693 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 HIST2H3PS2Q5TEC6 136 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 C8orf82Q6P1X6 216 aaPredicted RBP8.65□□□□□ -1.02
VPS50-201ENST00000251739 FBXW12Q6X9E4 464 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 C9orf139Q6ZV77 190 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 HIST2H3AQ71DI3 136 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 CBLL1Q75N03 491 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 HDXQ7Z353 690 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 ARPINQ7Z6K5 226 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 SLC15A3Q8IY34 581 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 KLHL36Q8N4N3 616 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 OR2Z1Q8NG97 314 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 SLC7A13Q8TCU3 470 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 SLC7A6Q92536 515 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 RCN3Q96D15 328 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 ZNF570Q96NI8 536 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 OR2V2Q96R30 315 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 FNDC11Q9BVV2 318 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 YY1AP1Q9H869 796 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 GCM1Q9NP62 436 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 NRIP3Q9NQ35 241 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 GID8Q9NWU2 228 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 VSX1Q9NZR4 365 aaPredicted RBP8.65□□□□□ -1.02
VPS50-201ENST00000251739 ASH2LQ9UBL3 628 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 NUP50Q9UKX7 468 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 SIGLEC7Q9Y286 467 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 LRCH1Q9Y2L9 728 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 PCDHGB1Q9Y5G3 927 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 AUP1Q9Y679 476 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 CAPN7Q9Y6W3 813 aa8.65□□□□□ -1.02
VPS50-201ENST00000251739 LOC100653049A0A140TA62 436 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 CEACAM18A8MTB9 384 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 F8W735 103 aaPredicted RBP8.64□□□□□ -1.03
VPS50-201ENST00000251739 NME4O00746 187 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 DYNC1I1O14576 645 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 IMPA2O14732 288 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 SURF4O15260 269 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 PTP4A3O75365 173 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 KRT34O76011 436 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 TXNDC12O95881 172 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 RNASE1P07998 156 aaKnown RBP8.64□□□□□ -1.03
VPS50-201ENST00000251739 TROVE2P10155 538 aaKnown RBP eCLIP8.64□□□□□ -1.03
VPS50-201ENST00000251739 TNFSF4P23510 183 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 CPT2P23786 658 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 IFNA8P32881 189 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 CD80P33681 288 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 GATA4P43694 442 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 RGS6P49758 472 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 GUCY1A3Q02108 690 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 FOXL1Q12952 345 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 KRR1Q13601 381 aaKnown RBP8.64□□□□□ -1.03
VPS50-201ENST00000251739 IFI44LQ53G44 452 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 CCDC92Q53HC0 331 aaPredicted RBP8.64□□□□□ -1.03
VPS50-201ENST00000251739 ARMCX4Q5H9R4 360 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 TBPL2Q6SJ96 375 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 ZNF730Q6ZMV8 503 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 PTCHD4Q6ZW05 846 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 ADCK1Q86TW2 530 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 BCL6BQ8N143 479 aaPredicted RBP8.64□□□□□ -1.03
VPS50-201ENST00000251739 MUC20Q8N307 709 aaPredicted RBP8.64□□□□□ -1.03
VPS50-201ENST00000251739 RASD2Q96D21 266 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 CMBLQ96DG6 245 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 COG8Q96MW5 612 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 DCLRE1CQ96SD1 692 aaKnown RBP8.64□□□□□ -1.03
VPS50-201ENST00000251739 C1QTNF5Q9BXJ0 243 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 SYT4Q9H2B2 425 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 ZNF696Q9H7X3 374 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 NMNAT1Q9HAN9 279 aaPredicted RBP8.64□□□□□ -1.03
VPS50-201ENST00000251739 DDX28Q9NUL7 540 aaKnown RBP8.64□□□□□ -1.03
VPS50-201ENST00000251739 GRHPRQ9UBQ7 328 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 TMEM5Q9Y2B1 443 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 AP3M1Q9Y2T2 418 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 ENPP4Q9Y6X5 453 aa8.64□□□□□ -1.03
VPS50-201ENST00000251739 A0A1W2PRQ8 180 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 IFNL4K9M1U5 179 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 CXCR6O00574 342 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 XKRYO14609 159 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 MLNRO43193 412 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 KCNAB3O43448 404 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 PLATP00750 562 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 DBHP09172 617 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 WNT2P09544 360 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 GSTT1P30711 240 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 SDHAP31040 664 aa8.63□□□□□ -1.03
VPS50-201ENST00000251739 RPL4P36578 427 aaKnown RBP8.63□□□□□ -1.03
VPS50-201ENST00000251739 GSK3BP49841 420 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms