RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 FAM60AQ9NP50 221 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 OGG1O15527 345 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 NKX2-2O95096 273 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 IGF2P01344 180 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 FCGR2CP31995 323 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 NKAIN1Q4KMZ8 207 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM196Q5HYL7 178 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SLAMF6Q96DU3 332 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PBX4Q9BYU1 374 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 OR10A2Q9H208 303 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SLCO5A1Q9H2Y9 848 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF768Q9H5H4 540 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 MED19A0JLT2 244 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 LRP3O75074 770 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ACY1Q03154 408 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 RHEBQ15382 184 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 GRINAQ7Z429 371 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 TAAR8Q969N4 342 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 LAT2Q9GZY6 243 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SPACA1Q9HBV2 294 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 A0A1W2PNR3 127 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 FAM221AA4D161 298 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SLC17A2O00624 439 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 DDAH2O95865 285 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 CTLA4P16410 223 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PSMB6P28072 239 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 RPS18P62269 152 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PLGLB1Q02325 96 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 RIPPLY1Q0D2K3 151 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 CAMK2BQ13554 666 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SNTB1Q13884 538 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 NPEPL1Q8NDH3 523 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 GPR173Q9NS66 373 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SF3B6Q9Y3B4 125 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PLXNB3Q9ULL4 1909 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SGCEO43556 437 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 TBXA2RP21731 343 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PEBP1P30086 187 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 DRD3P35462 400 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 DHRS2Q13268 280 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 EMC4Q5J8M3 183 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM81Q6P7N7 255 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 MRM2Q9UI43 246 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 THADAQ6YHU6 1953 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ARPC3O15145 178 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ICOSLGO75144 302 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ATG12O94817 140 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 JMJD7P0C870 316 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ELFN2Q5R3F8 820 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 OR10AC1Q8NH08 325 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 KCNG3Q8TAE7 436 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF578Q96N58 590 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ARPC5LQ9BPX5 153 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 MED29Q9NX70 200 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 OR52W1Q6IF63 320 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SLC22A24Q8N4F4 322 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF75AQ96N20 296 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ULBP2Q9BZM5 246 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 NKX6-2Q9C056 277 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SMCO4Q9NRQ5 59 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SUSD2Q9UGT4 822 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 C4orf47A7E2U8 309 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 C4orf51C9J302 202 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 CD80P33681 288 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF136P52737 540 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 EFNB2P52799 333 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 CLDN17P56750 224 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 RAB30Q15771 203 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 CDONQ4KMG0 1287 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PLCXD3Q63HM9 321 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 OGFOD3Q6PK18 319 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 GLDNQ6ZMI3 551 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ZCCHC4Q9H5U6 513 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 FANCFQ9NPI8 374 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 GPR84Q9NQS5 396 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF629Q9UEG4 869 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ACAD8Q9UKU7 415 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 YLPM1P49750 1951 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SHISA3A0PJX4 238 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM229AB2RXF0 380 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 GUSBP08236 651 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SDHAP31040 664 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 HRH1P35367 487 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PPICP45877 212 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 FMODQ06828 376 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PDZK1IP1Q13113 114 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ELAVL1Q15717 326 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ACTBL2Q562R1 376 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SLC43A2Q8N370 569 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PIGCQ92535 297 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 CDCA3Q99618 268 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 GAREM1Q9H706 876 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.17□□□□□ -1.743e-6■■■■□ 26.5
VPS13C-201ENST00000249837 PRR13Q9NZ81 148 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PIGLQ9Y2B2 252 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 EIF4E2O60573 245 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ZFAND5O76080 213 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 MPZL1O95297 269 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 CD96P40200 585 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SOHLH1Q5JUK2 328 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms