RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 PTBP1P26599 531 aaKnown RBP eCLIP12.47□□□□□ -0.41
SDF2-201ENST00000247020 CFPP27918 469 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 AGTR1P30556 359 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 CAV3P56539 151 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 CCDC92Q53HC0 331 aaPredicted RBP12.47□□□□□ -0.41
SDF2-201ENST00000247020 CEP78Q5JTW2 689 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 C16orf87Q6PH81 154 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 METAP1DQ6UB28 335 aaPredicted RBP12.47□□□□□ -0.41
SDF2-201ENST00000247020 STAC2Q6ZMT1 411 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 P4HA3Q7Z4N8 544 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 NR2C2APQ86WQ0 139 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 CCDC54Q8NEL0 328 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 CMTM3Q96MX0 182 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 PBOV1Q9GZY1 135 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 SLC7A10Q9NS82 523 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 UPB1Q9UBR1 384 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 LOC107986453A0A1B0GWG9 222 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 NCR1O76036 304 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 TGM6O95932 706 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 TTRP02766 147 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 EPXP11678 715 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 ZNF12P17014 697 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 CX3CR1P49238 355 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 TBR1Q16650 682 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 IDNKQ5T6J7 187 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 DPPA2Q7Z7J5 298 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 LAX1Q8IWV1 398 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 ZNF100Q8IYN0 542 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 LRRC18Q8N456 261 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 PARP16Q8N5Y8 322 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 ASB5Q8WWX0 329 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 WNT2BQ93097 391 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 SPTSSAQ969W0 71 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 FBXO17Q96EF6 278 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 MIXL1Q9H2W2 232 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 ABCB9Q9NP78 766 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 PLEK2Q9NYT0 353 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 MALT1Q9UDY8 824 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 LHX6Q9UPM6 363 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 TIMM10BQ9Y5J6 103 aa12.47□□□□□ -0.41
SDF2-201ENST00000247020 A0A087WV48 116 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 SMIM30A4D0T7 59 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 J3QRK9 145 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 SGCEO43556 437 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 B4GALT1P15291 398 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 THBS2P35442 1172 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 OR3A2P47893 321 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 SOX2P48431 317 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 SCAND1P57086 179 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 GUSBP1Q15486 140 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 KRTCAP3Q53RY4 240 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 OR2A2Q6IF42 318 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 ZNF813Q6ZN06 617 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 SLC16A14Q7RTX9 510 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 RDH10Q8IZV5 341 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 ZNF283Q8N7M2 679 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 OR51A4Q8NGJ6 313 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 OR10AC1Q8NH08 325 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 HTRA1Q92743 480 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 ABHD17AQ96GS6 310 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 GPR137Q96N19 417 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 CCDC32Q9BV29 185 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 SP140LQ9H930 580 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 CKLFQ9UBR5 152 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 SLC5A6Q9Y289 635 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 V9GY05 133 aa12.46□□□□□ -0.42
SDF2-201ENST00000247020 MED12LQ86YW9 2145 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 A0A0U1RQV5 110 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 A0A1W2PPK0 400 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 AIPO00170 330 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 SYNGR3O43761 229 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 CNOT4O95628 575 aaKnown RBP12.45□□□□□ -0.42
SDF2-201ENST00000247020 ADRB1P08588 477 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 ACSM4P0C7M7 580 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 CCL1P22362 96 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 PTGER4P35408 488 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 OR10A3P58181 314 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 ZNF121P58317 390 aaPredicted RBP12.45□□□□□ -0.42
SDF2-201ENST00000247020 ODF4Q2M2E3 257 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 SLC36A2Q495M3 483 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 FBXW9Q5XUX1 488 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 DRAM2Q6UX65 266 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 NUFIP2Q7Z417 695 aaKnown RBP12.45□□□□□ -0.42
SDF2-201ENST00000247020 LRRTM1Q86UE6 522 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 LRRC28Q86X40 367 aaPredicted RBP12.45□□□□□ -0.42
SDF2-201ENST00000247020 OR13C3Q8NGS6 347 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 SLC17A5Q9NRA2 495 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 COMMD3Q9UBI1 195 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 DAPK2Q9UIK4 370 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 CLEC4AQ9UMR7 237 aa12.45□□□□□ -0.42
SDF2-201ENST00000247020 A0A1B0GVI7 797 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 MEGF11A6BM72 1044 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 OR6C6A6NF89 314 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 IFITM5A6NNB3 132 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 DOK2O60496 412 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 MMP7P09237 267 aaPredicted RBP12.44□□□□□ -0.42
SDF2-201ENST00000247020 GABRA1P14867 456 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 ZNF32P17041 273 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 IGFBP3P17936 291 aaPredicted RBP12.44□□□□□ -0.42
SDF2-201ENST00000247020 CRYGSP22914 178 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms