RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 GUCA2AQ02747 115 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 ZNF92Q03936 586 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 ELAVL1Q15717 326 aaKnown RBP12.17□□□□□ -0.46
NEK4-201ENST00000233027 CTF1Q16619 201 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 C8orf44Q96CB5 159 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 DERL3Q96Q80 235 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 FN3KRPQ9HA64 309 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 SIT1Q9Y3P8 196 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 SPINT2O43291 252 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 TCN2P20062 427 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 KIR2DL3P43628 341 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 RBP2P50120 134 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 ZNF239Q16600 458 aaKnown RBP12.17□□□□□ -0.46
NEK4-201ENST00000233027 TIGD3Q6B0B8 471 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 MARCH1Q8TCQ1 289 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 TARM1B6A8C7 271 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 ST8SIA3O43173 380 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 TMEM88Q6PEY1 159 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 LCN15Q6UWW0 184 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 ZC3HAV1LQ96H79 300 aaKnown RBP12.17□□□□□ -0.46
NEK4-201ENST00000233027 SLC25A32Q9H2D1 315 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 SCPEP1Q9HB40 452 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 SLCO1C1Q9NYB5 712 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 V9GYS6 101 aa12.17□□□□□ -0.46
NEK4-201ENST00000233027 OR2B8PP59922 312 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 PLPP6Q8IY26 295 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 PRELID3BQ9Y3B1 194 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 OR51B4Q9Y5P0 310 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 OLFM2O95897 454 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 IAPPP10997 89 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 ST6GAL1P15907 406 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 ACKR3P25106 362 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 MLF2Q15773 248 aaPredicted RBP12.16□□□□□ -0.46
NEK4-201ENST00000233027 AANATQ16613 207 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 USP51Q70EK9 711 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 C16orf52Q8NHV5 167 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 ASB16Q96NS5 453 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 LYSMD1Q96S90 227 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 FAM103A1Q9BTL3 118 aaKnown RBP12.16□□□□□ -0.46
NEK4-201ENST00000233027 BARHL1Q9BZE3 327 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 SAGE1Q9NXZ1 904 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 PLEKHB1Q9UF11 243 aaPredicted RBP12.16□□□□□ -0.46
NEK4-201ENST00000233027 ZNF732B4DXR9 585 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 SIRPB1O00241 398 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 EN2P19622 333 aaPredicted RBP12.16□□□□□ -0.46
NEK4-201ENST00000233027 PSMB6P28072 239 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 DPTQ07507 201 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 SPANXN5Q5MJ07 72 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 SMIM15Q7Z3B0 74 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 FBXW5Q969U6 566 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 CCDC74AQ96AQ1 378 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 TVP23CQ96ET8 276 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 KCNE3Q9Y6H6 103 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 SLCO1B1Q9Y6L6 691 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 H7C1Q1 480 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 GABRA4P48169 554 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 ARIH2OSQ8N7S6 290 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 SEH1LQ96EE3 360 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 THOC3Q96J01 351 aaKnown RBP12.16□□□□□ -0.46
NEK4-201ENST00000233027 SLC22A11Q9NSA0 550 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 B3GAT1Q9P2W7 334 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 OR2W5A6NFC9 320 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 ZNF354AO60765 605 aaPredicted RBP12.16□□□□□ -0.46
NEK4-201ENST00000233027 ZDHHC11BP0C7U3 371 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 CYB561P49447 251 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 EGR3Q06889 387 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 EMC4Q5J8M3 183 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 PLXDC2Q6UX71 529 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 SLC38A9Q8NBW4 561 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 ZNF680Q8NEM1 530 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 BAHD1Q8TBE0 780 aaPredicted RBP12.16□□□□□ -0.46
NEK4-201ENST00000233027 REEP6Q96HR9 211 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 ISYNA1Q9NPH2 558 aa12.16□□□□□ -0.46
NEK4-201ENST00000233027 F6UZH7 168 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 ADAM10O14672 748 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 MT-ND4LP03901 98 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 CD1EP15812 388 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 CD22P20273 847 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 TFAP2EQ6VUC0 442 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 PBOV1Q9GZY1 135 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 PRSS37A4D1T9 235 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 TRAF3IP2O43734 574 aaPredicted RBP12.15□□□□□ -0.46
NEK4-201ENST00000233027 OR2J2O76002 312 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 PPP2CBP62714 309 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 PPP2CAP67775 309 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 GPR119Q8TDV5 335 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 APH1AQ96BI3 265 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 LAT2Q9GZY6 243 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 UFSP2Q9NUQ7 469 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 SIRT5Q9NXA8 310 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 PDE4DIPQ5VU43 2346 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 A0A096LPE4 126 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 A0A1W2PPZ6 126 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 C20orf202A1L168 122 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 ARRDC5A6NEK1 342 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 CT45A6P0DMU7 189 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 CT45A5P0DMU8 189 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 CT45A7P0DMV0 189 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 CT45A8P0DMV1 189 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 CT45A9P0DMV2 189 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms