RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TMEM179BQ7Z7N9 219 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 BPIFB2Q8N4F0 458 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 OR4M1Q8NGD0 313 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 RNF128Q8TEB7 428 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 RRNAD1Q96FB5 475 aaKnown RBP8.5□□□□□ -1.05
CCDC113-201ENST00000219299 ZNF442Q9H7R0 627 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 CHST11Q9NPF2 352 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 UFSP2Q9NUQ7 469 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 KIF25Q9UIL4 384 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 TRGV5A0A0B4J1U4 118 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 TRGV8A0A0C4DH27 118 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 MASP2O00187 686 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 ZNF593O00488 134 aaPredicted RBP8.5□□□□□ -1.05
CCDC113-201ENST00000219299 LRP3O75074 770 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 IL2RAP01589 272 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 C1QCP02747 245 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 LIPCP11150 499 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 MAKP20794 623 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 SLC2A5P22732 501 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 NUBP1P53384 320 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 DSCR4P56555 118 aaPredicted RBP8.5□□□□□ -1.05
CCDC113-201ENST00000219299 RPL18Q07020 188 aaKnown RBP8.5□□□□□ -1.05
CCDC113-201ENST00000219299 P2RY14Q15391 338 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 PAN3Q58A45 887 aaKnown RBP8.5□□□□□ -1.05
CCDC113-201ENST00000219299 ACSM5Q6NUN0 579 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 FCRLAQ7L513 359 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 SIAH3Q8IW03 269 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 APH1AQ96BI3 265 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 DDA1Q9BW61 102 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 KCNS2Q9ULS6 477 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 ZNF175Q9Y473 711 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 OTOGLQ3ZCN5 2332 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 SYT7O43581 403 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 LPLP06858 475 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 SERPINF1P36955 418 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 POU3F4P49335 361 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 UBE2KP61086 200 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 HSF1Q00613 529 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 GPR50Q13585 617 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 SFXN4Q6P4A7 337 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 LINC00346Q8IVM7 164 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 MRPL41Q8IXM3 137 aaKnown RBP8.5□□□□□ -1.05
CCDC113-201ENST00000219299 C9orf40Q8IXQ3 194 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 SLC43A2Q8N370 569 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 SLC38A9Q8NBW4 561 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 M1APQ8TC57 530 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 DYNC2LI1Q8TCX1 351 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 TRIB1Q96RU8 372 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 NKX6-2Q9C056 277 aaPredicted RBP8.5□□□□□ -1.05
CCDC113-201ENST00000219299 AKIP1Q9NQ31 210 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 FAM212BQ9NTI7 297 aaPredicted RBP8.5□□□□□ -1.05
CCDC113-201ENST00000219299 HS3ST3B1Q9Y662 390 aa8.5□□□□□ -1.05
CCDC113-201ENST00000219299 TRBV5-3A0A0A0MS03 114 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 TMEM269A0A1B0GVZ9 245 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 MEIS3P1A6NDR6 274 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 FIGNL2A6NMB9 653 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 RAF1P04049 648 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 OR8G3PP0DMU2 310 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 CD226Q15762 336 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 ZNF620Q6ZNG0 422 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 CPT1CQ8TCG5 803 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 ROBO4Q8WZ75 1007 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 HAS2Q92819 552 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 PLCXD1Q9NUJ7 323 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 A8MXE2 369 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 TNFSF11O14788 317 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 ADRB1P08588 477 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 MEOX1P50221 254 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 AKR1C2P52895 323 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 SUMO3P55854 103 aaPredicted RBP8.49□□□□□ -1.05
CCDC113-201ENST00000219299 RSU1Q15404 277 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.49□□□□□ -1.05
CCDC113-201ENST00000219299 RSPO4Q2I0M5 234 aaPredicted RBP8.49□□□□□ -1.05
CCDC113-201ENST00000219299 MRPL21Q7Z2W9 205 aaKnown RBP8.49□□□□□ -1.05
CCDC113-201ENST00000219299 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.49□□□□□ -1.05
CCDC113-201ENST00000219299 ZNF695Q8IW36 515 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 EXD3Q8N9H8 876 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 NPRL2Q8WTW4 380 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 SLC25A31Q9H0C2 315 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 OR10A2Q9H208 303 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 ELOVL3Q9HB03 270 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 A4GNTQ9UNA3 340 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 TMEM184BQ9Y519 407 aaPredicted RBP8.49□□□□□ -1.05
CCDC113-201ENST00000219299 TIMM8BQ9Y5J9 83 aaPredicted RBP8.49□□□□□ -1.05
CCDC113-201ENST00000219299 HEATR5BQ9P2D3 2071 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 ANKUB1A6NFN9 424 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 ZNF587BE7ETH6 402 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 MPIG6BO95866 241 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 SMIM10L1P0DMW3 83 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 SNRPBP14678 240 aaKnown RBP8.49□□□□□ -1.05
CCDC113-201ENST00000219299 RPS19P39019 145 aaKnown RBP8.49□□□□□ -1.05
CCDC113-201ENST00000219299 EFNA3P52797 238 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 RPL27P61353 136 aaKnown RBP8.49□□□□□ -1.05
CCDC113-201ENST00000219299 TMUB2Q71RG4 321 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 DND1Q8IYX4 353 aaKnown RBP8.49□□□□□ -1.05
CCDC113-201ENST00000219299 OR4Q3Q8NH05 313 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 FAM122AQ96E09 287 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 SMIM10Q96HG1 83 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 FKRPQ9H9S5 495 aa8.49□□□□□ -1.05
CCDC113-201ENST00000219299 B3GALT5Q9Y2C3 310 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms