RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 NUDT9Q9BW91 350 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 PADI1Q9ULC6 663 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 SCN11AQ9UI33 1791 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 HMSDA8MTL9 139 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 CLDN34H7C241 214 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 DDAH2O95865 285 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 POU3F2P20265 443 aaPredicted RBP9.55□□□□□ -0.88
VCL-201ENST00000211998 GSK3AP49840 483 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 IFITM3Q01628 133 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 LIPNQ5VXI9 398 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 MS4A4AQ96JQ5 239 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 SLC35B3Q9H1N7 401 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 LHX3Q9UBR4 397 aa9.55□□□□□ -0.88
VCL-201ENST00000211998 A0A087WUU8 490 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 ZFAND5O76080 213 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 CPMP14384 443 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 RGRP47804 291 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 PCBD1P61457 104 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 SLC35A1P78382 337 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 CTBSQ01459 385 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 AWAT1Q58HT5 328 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 MKXQ8IYA7 352 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 TCTEX1D1Q8N7M0 179 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 MFSD9Q8NBP5 474 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 TCTN2Q96GX1 697 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 DERL3Q96Q80 235 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 TPPP3Q9BW30 176 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 GPR87Q9BY21 358 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 BANF2Q9H503 90 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 TAS2R4Q9NYW5 299 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 C4BP0C0L5 1744 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 TRBV23-1A0A0A0MS06 115 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 GPR75O95800 540 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 RPA2P15927 270 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 CXCL3P19876 107 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 HRH1P35367 487 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 PTGFRP43088 359 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 OR5I1Q13606 314 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 SSX1Q16384 188 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 THNSL2Q86YJ6 484 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 LINC00469Q8N7U9 141 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 PIGCQ92535 297 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 PRDM7Q9NQW5 492 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 UBQLN4Q9NRR5 601 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 SSSCA1O60232 199 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 GALR3O60755 368 aaPredicted RBP9.54□□□□□ -0.88
VCL-201ENST00000211998 TUSC2O75896 110 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 AIFM1O95831 613 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 DAOP14920 347 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 LANCL3Q6ZV70 420 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 TAS1R1Q7RTX1 841 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 ZNF595Q8IYB9 648 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 MUC20Q8N307 709 aaPredicted RBP9.54□□□□□ -0.88
VCL-201ENST00000211998 PSMF1Q92530 271 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 FBXO17Q96EF6 278 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 CTDSP1Q9GZU7 261 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 VDAC3Q9Y277 283 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 HSD17B6O14756 317 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 MBTPS2O43462 519 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 GABRA1P14867 456 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 HOXD9P28356 352 aaPredicted RBP9.54□□□□□ -0.88
VCL-201ENST00000211998 LTB4RQ15722 352 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 ZNF2Q9BSG1 426 aaPredicted RBP9.54□□□□□ -0.88
VCL-201ENST00000211998 GPR160Q9UJ42 338 aa9.54□□□□□ -0.88
VCL-201ENST00000211998 ELF5Q9UKW6 265 aaPredicted RBP9.54□□□□□ -0.88
VCL-201ENST00000211998 A0A1B0GWA3 101 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 DVL1O14640 695 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 CD79AP11912 226 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 ICAM2P13598 275 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 TSFMP43897 325 aaKnown RBP9.53□□□□□ -0.88
VCL-201ENST00000211998 POU3F1Q03052 451 aaPredicted RBP9.53□□□□□ -0.88
VCL-201ENST00000211998 FAM26DQ5JW98 314 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 Q6ZN92 141 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 STT3BQ8TCJ2 826 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 HSD17B8Q92506 261 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 ORAI1Q96D31 301 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 SMIM19Q96E16 107 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 CUTCQ9NTM9 273 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 LOC105371267A0A1B0GV96 52 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 SDCBPO00560 298 aaPredicted RBP9.53□□□□□ -0.88
VCL-201ENST00000211998 CIDEAO60543 219 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 C1SP09871 688 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 GDF1P27539 372 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 PSMB5P28074 263 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 HAAOP46952 286 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 GUCA2AQ02747 115 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 ZP2Q05996 745 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 PRDX1Q06830 199 aaKnown RBP9.53□□□□□ -0.88
VCL-201ENST00000211998 OR5B3Q8NH48 314 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 DTD1Q8TEA8 209 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 SEC11CQ9BY50 192 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 WSB2Q9NYS7 404 aaPredicted RBP9.53□□□□□ -0.88
VCL-201ENST00000211998 TAAR2Q9P1P5 351 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 BOKQ9UMX3 212 aaPredicted RBP9.53□□□□□ -0.88
VCL-201ENST00000211998 HS3ST2Q9Y278 367 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 TRAPPC2LH3BP13 241 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 HSPB6O14558 160 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 CST4P01036 141 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 SBK3P0C264 359 aa9.53□□□□□ -0.88
VCL-201ENST00000211998 RAB38P57729 211 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms