RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Vmn1r231Q8R2A3 311 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Ccdc59Q8R2N0 240 aaKnown RBP9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Znhit1Q8R331 154 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Crtac1Q8R555 646 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Olfr166Q8VGX2 312 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Hyal1Q91ZJ9 462 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Slc25a37Q920G8 338 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Tpra1Q99MU1 369 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Cep41Q99NF3 373 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Abcg5Q99PE8 652 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Lrrc18Q9CQ07 262 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Prps1Q9D7G0 318 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Samd8Q9DA37 478 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Tysnd1Q9DBA6 568 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Osbpl3Q9DBS9 855 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 PaicsQ9DCL9 425 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 GlceQ9EPS3 618 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 GmfgQ9ERL7 142 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Gab1Q9QYY0 695 aa9.92□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Igkv14-126A0A075B5K0 117 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Gm38303A0A0A6YWW8 100 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Fcgr4A0A0B4J1G0 249 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Krtap10-10A0A1W2P7T6 217 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Zfp944E9PUS4 492 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Olfr370E9Q848 314 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 C2cd4aE9Q861 334 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Serpinb9cI7HJI5 387 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Olfr1360K9J6X0 313 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Casp6O08738 276 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 ClockO08785 855 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Slc22a1O08966 556 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 OtpO09113 325 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Psmc3ipO35047 217 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 MbP04247 154 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Il7rP16872 459 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Gna13P27601 377 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Lyl1P27792 278 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Camk2bP28652 542 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Cdh10P70408 788 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Cmpk2Q3U5Q7 447 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Acsm3Q3UNX5 580 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Mylk4Q5SUV5 386 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Foxb1Q64732 325 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Smarcd3Q6P9Z1 483 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 P4ha3Q6W3F0 542 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Olfr1359Q7TQU5 313 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Mettl6Q8BVH9 282 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Znf385bQ8BXJ8 482 aaKnown RBP9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Rrnad1Q8BZG5 475 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Nhlrc2Q8BZW8 725 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Irf2bplQ8K3X4 775 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 AfmidQ8K4H1 305 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Cd276Q8VE98 316 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Klhdc3Q8VEM9 382 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Olfr998Q8VF76 314 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Olfr330Q8VGD9 315 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Olfr1272Q8VGN8 308 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Gtf3aQ8VHT7 364 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Acsm1Q91VA0 573 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 AldobQ91Y97 364 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Actr3Q99JY9 418 aaKnown RBP9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Znhit3Q9CQK1 151 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Mri1Q9CQT1 369 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Snapc3Q9D2C9 407 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 MeiobQ9D513 470 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Serpini2Q9JK88 405 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 NmuQ9QXK8 174 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Fbxo15Q9QZN0 433 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Atp6v1g2Q9WTT4 118 aa9.91□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Gm4131A0A140LJ24 318 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Lrr1D3YY91 422 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Tmem233D3Z1U7 110 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Gm17555F6U8B9 371 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Zfp275G3X904 499 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Gm20683H3BKJ1 410 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Bbip1J3QMK2 67 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Olfr190K7N5T5 307 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Gm21750L7N228 499 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 RrhO35214 337 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Socs2O35717 198 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Stk16O88697 305 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Hoxa6P09092 232 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Ythdf1P59326 559 aaKnown RBP9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Dnaja1P63037 397 aaKnown RBP9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Pip5k1aP70182 546 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Pou1f1Q00286 291 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Sox14Q04892 240 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 SryQ05738 395 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Thbs3Q05895 956 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Kbtbd8Q3UQV5 599 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Arhgef9Q3UTH8 516 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Dcdc2Q5DU00 475 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Pou4f3Q63955 338 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Vwc2Q8C8N3 324 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 4933402N03RikQ8CDT9 329 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Wipi1Q8R3E3 446 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Chrnb4Q8R493 495 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Olfr1277Q8VF41 303 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Cdhr5Q8VHF2 831 aa9.9□□□□□ -0.82
Ccdc28b-201ENSMUST00000030586 Slc7a12Q8VIE6 465 aa9.9□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms