RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr1510E9PZZ6 318 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Zfp820E9Q5G8 549 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm3099J3QPA5 205 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Vmn1r175K7N6T9 304 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 4930555G01RikL7N253 205 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Bnip2O54940 326 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 P06336 421 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Ggta1P23336 394 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Agtr1aP29754 359 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Tnfsf9P41274 309 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Slc2a9Q3T9X0 538 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 1700057G04RikQ3V0U0 232 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 HhipQ7TN16 700 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Fbxl2Q8BH16 423 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1094Q8VF13 330 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Rab30Q923S9 203 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Mgst3Q9CPU4 153 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 Calm4Q9JM83 148 aa14.86□□□□□ -0.03
Shh-201ENSMUST00000002708 H2-EaP01904 255 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 P04224 255 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Tcrg-V1P06325 135 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Tnfrsf1bP25119 474 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 SelenopP70274 380 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 C1rlQ3UZ09 482 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Mettl7a2Q5I0W6 244 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Tfap2eQ6VUP9 442 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 B630019K06RikQ7TNS5 333 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 RinlQ80UW3 563 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Coro2bQ8BH44 480 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Psmf1Q8BHL8 271 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Rpusd1Q8VCZ8 306 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr678Q8VG26 313 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Scgb3a1Q920D7 104 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Nsa2Q9CR47 260 aaKnown RBP14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Pycr3Q9DCC4 274 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Moap1Q9ERH6 352 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Mrpl39Q9JKF7 336 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Tas2r105Q9JKT4 300 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Adam28Q9JLN6 793 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Usp18Q9WTV6 368 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Gpr179E9PY61 2293 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Hist1h2abC0HKE1 130 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Hist1h2acC0HKE2 130 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Hist1h2adC0HKE3 130 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Hist1h2aeC0HKE4 130 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Hist1h2agC0HKE5 130 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Hist1h2aiC0HKE6 130 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Hist1h2anC0HKE7 130 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Hist1h2aoC0HKE8 130 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Hist1h2apC0HKE9 130 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr585E9PXW4 318 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Vmn1r68E9Q0V3 319 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr618K7N6B3 318 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Agpat1O35083 285 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Wnt9bO35468 359 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Rad51dO55230 329 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 CapzbP47757 277 aaKnown RBP14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Rap2bP61226 183 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Col10a1Q05306 680 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Prtn3Q61096 254 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Gpatch2Q7TQC7 527 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Hist3h2aQ8BFU2 130 aaKnown RBP14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 PigtQ8BXQ2 582 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Hist1h2afQ8CGP5 130 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Ocel1Q8VCR9 219 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 HypmQ9CR04 117 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Ttyh1Q9D3A9 450 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Lime1Q9EQR5 269 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Pde7bQ9QXQ1 446 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 Efemp2Q9WVJ9 443 aa14.85□□□□□ -0.03
Shh-201ENSMUST00000002708 4930563M21RikA0A1L1SUT5 578 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm42517A0A1Y7VLQ2 374 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1156A2AVC3 323 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr173E9QAT7 321 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Tango2P54797 276 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Gabra1P62812 455 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 CelQ64285 599 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 LcorQ6ZPI3 433 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Carns1Q6ZPS2 827 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 C730034F03RikQ8BGL5 111 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Nars2Q8BGV0 477 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Zdhhc1Q8R0N9 484 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Q8R3Y5 413 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Vmn1r42Q8VBS7 329 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr1217Q8VGG1 304 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 B3gat1Q9CW73 334 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Slc22a5Q9Z0E8 557 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 A26c2A0A140LHE4 291 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Gm21976J3QNN2 249 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Hdac3O88895 424 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 mt-Co3P00416 261 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Ctla4P09793 223 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Cxcl2P10889 100 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Mst1P26928 716 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Ctf1Q60753 203 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Grm7Q68ED2 915 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Kng2Q6S9I3 644 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Uhrf2Q7TMI3 803 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Olfr290Q7TS13 315 aa14.84□□□□□ -0.03
Shh-201ENSMUST00000002708 Jazf1Q80ZQ5 243 aa14.84□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms