RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CCDC54Q8NEL0 328 aa15.22■□□□□ 0.03
PHGDH-234ENST00000642041 OR5AK2Q8NH90 309 aa15.22■□□□□ 0.03
PHGDH-234ENST00000642041 ITFG2Q969R8 447 aa15.22■□□□□ 0.03
PHGDH-234ENST00000642041 TMED9Q9BVK6 235 aa15.22■□□□□ 0.03
PHGDH-234ENST00000642041 RERGLQ9H628 205 aa15.22■□□□□ 0.03
PHGDH-234ENST00000642041 MOB1AQ9H8S9 216 aa15.22■□□□□ 0.03
PHGDH-234ENST00000642041 GLTPQ9NZD2 209 aa15.22■□□□□ 0.03
PHGDH-234ENST00000642041 MCTS1Q9ULC4 181 aaKnown RBP15.22■□□□□ 0.03
PHGDH-234ENST00000642041 COA3Q9Y2R0 106 aaPredicted RBP15.22■□□□□ 0.03
PHGDH-234ENST00000642041 A0A0J9YW62 118 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 ISPDA4D126 451 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 KIAA1324LA8MWY0 1029 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-234ENST00000642041 G3V3Y1 287 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 SLC43A1O75387 559 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 SC5DO75845 299 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 LALBAP00709 142 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 SDC2P34741 201 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 RPS19P39019 145 aaKnown RBP15.21■□□□□ 0.03
PHGDH-234ENST00000642041 CSNK1A1P48729 337 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 PPP3R1P63098 170 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 MELKQ14680 651 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 TP53I3Q53FA7 332 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 ACSM3Q53FZ2 586 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 C16orf87Q6PH81 154 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 SLC25A47Q6Q0C1 308 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 KLHL24Q6TFL4 600 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 UNQ9370/PRO34162Q6UXP9 181 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 ZNF704Q6ZNC4 412 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-234ENST00000642041 PRIMA1Q86XR5 153 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 OR9K2Q8NGE7 335 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 OR6N1Q8NGY5 312 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 OR52N5Q8NH56 324 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 ZPLD1Q8TCW7 415 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 RNF128Q8TEB7 428 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 NRGNQ92686 78 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 TMEM203Q969S6 136 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 TMEM45BQ96B21 275 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 TSSK2Q96PF2 358 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 HDHD5Q9BXW7 423 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 TTTY12Q9BZ98 90 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 C6orf62Q9GZU0 229 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-234ENST00000642041 TMEM185BQ9H7F4 350 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 ZNF835Q9Y2P0 537 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 UGT2A1Q9Y4X1 527 aa15.21■□□□□ 0.03
PHGDH-234ENST00000642041 SHISA8B8ZZ34 492 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 EIF1AYO14602 144 aaKnown RBP15.2■□□□□ 0.02
PHGDH-234ENST00000642041 CYTIPO60759 359 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 SPARCP09486 303 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 HLA-DOBP13765 273 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 IGFBP2P18065 325 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 CAPZA1P52907 286 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 SCAND1P57086 179 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 EIF2B1Q14232 305 aaKnown RBP15.2■□□□□ 0.02
PHGDH-234ENST00000642041 RNPS1Q15287 305 aaKnown RBP15.2■□□□□ 0.02
PHGDH-234ENST00000642041 CEACAM19Q7Z692 300 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 YRDCQ86U90 279 aaKnown RBP15.2■□□□□ 0.02
PHGDH-234ENST00000642041 TMEM200AQ86VY9 491 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 GPR148Q8TDV2 347 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 TMEM54Q969K7 222 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 ADGRG7Q96K78 797 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 PGLYRP3Q96LB9 341 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 NPAS1Q99742 590 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 TM9SF2Q99805 663 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 SP140LQ9H930 580 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 SNTG1Q9NSN8 517 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 DEPPQ9NTK1 212 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 MED29Q9NX70 200 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 EML6Q6ZMW3 1958 aa15.2■□□□□ 0.02
PHGDH-234ENST00000642041 ATRQ13535 2644 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 GTF3C1Q12789 2109 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 A0A0G2JMM0 328 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 A0A1W2PPB8 328 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 A0A1W2PRS3 328 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 KIR3DP1A8MWS1 328 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 H7C1C5 153 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 DCTN6O00399 190 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 CD2P06729 351 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 MEOX1P50221 254 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 CLDN17P56750 224 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 LCN6P62502 163 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 PPIAP62937 165 aaKnown RBP15.19■□□□□ 0.02
PHGDH-234ENST00000642041 SLC3A1Q07837 685 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 Q499Y3 187 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 ZMAT1Q5H9K5 638 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 WIPI1Q5MNZ9 446 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-234ENST00000642041 TMEM244Q5VVB8 128 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 FOXL2NBQ6ZUU3 175 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 GALNTL5Q7Z4T8 443 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 SYT9Q86SS6 491 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 KDM8Q8N371 416 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 OR5M1Q8NGP8 315 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 CA5BP1Q8WTZ4 195 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 ABTB1Q969K4 478 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-234ENST00000642041 MCHR2Q969V1 340 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 TXNDC15Q96J42 360 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 CCDC32Q9BV29 185 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 AKIP1Q9NQ31 210 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 GLRX2Q9NS18 164 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 ABRACLQ9P1F3 81 aa15.19■□□□□ 0.02
PHGDH-234ENST00000642041 MRM2Q9UI43 246 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms