RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 C8orf44Q96CB5 159 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 SLC25A44Q96H78 314 aaPredicted RBP12.29□□□□□ -0.44
PAX6-280ENST00000640872 DGAT2Q96PD7 388 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 MTIF3Q9H2K0 278 aaKnown RBP12.29□□□□□ -0.44
PAX6-280ENST00000640872 MRPL22Q9NWU5 206 aaKnown RBP12.29□□□□□ -0.44
PAX6-280ENST00000640872 RHBDD3Q9Y3P4 386 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 ARHGEF17Q96PE2 2063 aaPredicted RBP12.29□□□□□ -0.44
PAX6-280ENST00000640872 TRBV6-7A0A0A0MS04 114 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 TEX13DA0A0J9YY54 714 aaPredicted RBP12.29□□□□□ -0.44
PAX6-280ENST00000640872 LOC390937A0A1W2PQ73 354 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 DCDC2BA2VCK2 349 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 NUDT19A8MXV4 375 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 K7EQS6 105 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 ZNF208O43345 1280 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 KCNAB3O43448 404 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 PRKNO60260 465 aaPredicted RBP12.29□□□□□ -0.44
PAX6-280ENST00000640872 HLA-DQA2P01906 255 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 CLPSP04118 112 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 CRHP06850 196 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 PGAM2P15259 253 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 ARRB1P49407 418 aaPredicted RBP12.29□□□□□ -0.44
PAX6-280ENST00000640872 SKP1P63208 163 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 ADAM8P78325 824 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 IL13RA1P78552 427 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 DEFB110Q30KQ9 67 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 H3F3CQ6NXT2 135 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 FAHD2BQ6P2I3 314 aaPredicted RBP12.29□□□□□ -0.44
PAX6-280ENST00000640872 LYPD6Q86Y78 171 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 FOXRED1Q96CU9 486 aaPredicted RBP12.29□□□□□ -0.44
PAX6-280ENST00000640872 FAHD2AQ96GK7 314 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 FAM60AQ9NP50 221 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 HRASLS2Q9NWW9 162 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 MYEF2Q9P2K5 600 aaKnown RBP12.29□□□□□ -0.44
PAX6-280ENST00000640872 CACNA1CQ13936 2221 aa12.29□□□□□ -0.44
PAX6-280ENST00000640872 A0A0A6YYC8 382 aaPredicted RBP12.28□□□□□ -0.44
PAX6-280ENST00000640872 CPED1A4D0V7 1026 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 I3L1I5 382 aaPredicted RBP12.28□□□□□ -0.44
PAX6-280ENST00000640872 NUDT21O43809 227 aaKnown RBP12.28□□□□□ -0.44
PAX6-280ENST00000640872 SPARCP09486 303 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 RNH1P13489 461 aaKnown RBP12.28□□□□□ -0.44
PAX6-280ENST00000640872 TPT1P13693 172 aaKnown RBP12.28□□□□□ -0.44
PAX6-280ENST00000640872 NPBWR1P48145 328 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 MEOX2P50222 304 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 BTG2P78543 158 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 NAAAQ02083 359 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 OR7A5Q15622 319 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 PNLIPRP3Q17RR3 467 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 ZNF260Q3ZCT1 412 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 CDNFQ49AH0 187 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 C1orf100Q5SVJ3 147 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 MED25Q71SY5 747 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 PGAP1Q75T13 922 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 FJX1Q86VR8 437 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 OR4K17Q8NGC6 315 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 GLYATL2Q8WU03 294 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 CYTL1Q9NRR1 136 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 UBQLN4Q9NRR5 601 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 LOC100509620A0A075B734 347 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 DBX1A6NMT0 343 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 EEF1E1-BLOC1S5C9J1V9 151 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 EIF1AYO14602 144 aaKnown RBP12.28□□□□□ -0.44
PAX6-280ENST00000640872 SNAPINO95295 136 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 F12P00748 615 aaPredicted RBP12.28□□□□□ -0.44
PAX6-280ENST00000640872 BGLAPP02818 100 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 EIF1AXP47813 144 aaKnown RBP12.28□□□□□ -0.44
PAX6-280ENST00000640872 ERV3-1Q14264 604 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 MDGA2Q7Z553 956 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 BAP18Q8IXM2 172 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 ACBD4Q8NC06 268 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 RNF141Q8WVD5 230 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 ASB12Q8WXK4 309 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 BMFQ96LC9 184 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 CNTNAP3BQ96NU0 1288 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 NKX2-4Q9H2Z4 354 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 PRTFDC1Q9NRG1 225 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 ZFP57Q9NU63 452 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 LRP12Q9Y561 859 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 CSAG2Q9Y5P2 127 aa12.28□□□□□ -0.44
PAX6-280ENST00000640872 IGLV1-36A0A0B4J1U3 117 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 PRSS37A4D1T9 235 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 MEGF11A6BM72 1044 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 FAM221BA6H8Z2 402 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 XKRYO14609 159 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 EFSO43281 561 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 ZNF264O43296 627 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 SRSF10O75494 262 aaKnown RBP12.27□□□□□ -0.44
PAX6-280ENST00000640872 STK17BO94768 372 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 HEXAP06865 529 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 RAB6AP20340 208 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 PSMB6P28072 239 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 KIR2DL1P43626 348 aaPredicted RBP12.27□□□□□ -0.44
PAX6-280ENST00000640872 RIDAP52758 137 aaKnown RBP12.27□□□□□ -0.44
PAX6-280ENST00000640872 SPOCK1Q08629 439 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 TRAPPC6BQ86SZ2 158 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 JAGN1Q8N5M9 183 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 ADAD2Q8NCV1 583 aaKnown RBP12.27□□□□□ -0.44
PAX6-280ENST00000640872 CASTOR1Q8WTX7 329 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 SEC11CQ9BY50 192 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 SELENOIQ9C0D9 397 aa12.27□□□□□ -0.44
PAX6-280ENST00000640872 ADAM19Q9H013 955 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms