RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 GPRIN2O60269 458 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 TMCC2O75069 709 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 FAM157BP0CG42 384 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 COX5BP10606 129 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 NR4A1P22736 598 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 CAPGP40121 348 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 WNT5AP41221 380 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 NKX6-1P78426 367 aaPredicted RBP11.4□□□□□ -0.58
GTF3A-209ENST00000640289 IL5RAQ01344 420 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 GALK2Q01415 458 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 SNTB2Q13425 540 aaKnown RBP11.4□□□□□ -0.58
GTF3A-209ENST00000640289 ZNF691Q5VV52 312 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 TTC23Q5W5X9 447 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 SPATC1Q76KD6 591 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 SLC16A9Q7RTY1 509 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 ZNF101Q8IZC7 436 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 OR4F15Q8NGB8 312 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 OR1J2Q8NGS2 313 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 RHOXF1Q8NHV9 184 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 ST7LQ8TDW4 575 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 APH1BQ8WW43 257 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 FBXW5Q969U6 566 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 SLAMF6Q96DU3 332 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 HDHD2Q9H0R4 259 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 KLHDC2Q9Y2U9 406 aa11.4□□□□□ -0.58
GTF3A-209ENST00000640289 APOL3O95236 402 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 GNAO1P09471 354 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 HTR1FP30939 366 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 THBS4P35443 961 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 ERVS71-1P61550 626 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 GGTLC2Q14390 218 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 OCLNQ16625 522 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 MSMPQ1L6U9 139 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 RSPO1Q2MKA7 263 aaPredicted RBP11.39□□□□□ -0.59
GTF3A-209ENST00000640289 SLC25A30Q5SVS4 291 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 MEDAGQ5VYS4 303 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 SHFQ7M4L6 423 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 ZNF611Q8N823 705 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 NUP37Q8NFH4 326 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 OR51G2Q8NGK0 314 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 OTOSQ8NHW6 89 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 CNN2Q99439 309 aaKnown RBP11.39□□□□□ -0.59
GTF3A-209ENST00000640289 COQ7Q99807 217 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 ATF6BQ99941 703 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 APOL4Q9BPW4 351 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 DHRS9Q9BPW9 319 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 ABHD6Q9BV23 337 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 TTTY10Q9BZA0 68 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 ADGRL4Q9HBW9 690 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 CA10Q9NS85 328 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 CENPMQ9NSP4 180 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 WARS2Q9UGM6 360 aaKnown RBP11.39□□□□□ -0.59
GTF3A-209ENST00000640289 COPS3Q9UNS2 423 aa11.39□□□□□ -0.59
GTF3A-209ENST00000640289 F5H5K5 113 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 H0YAE9 185 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 MPZL2O60487 215 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 SMPD2O60906 423 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 NGFP01138 241 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 LYNP07948 512 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 SOD3P08294 240 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 SBK2P0C263 348 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 DANCRP0C864 163 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 FABP6P51161 128 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 NUDT6P53370 316 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 UCP2P55851 309 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 MAD2L1BPQ15013 274 aaPredicted RBP11.38□□□□□ -0.59
GTF3A-209ENST00000640289 SMN1Q16637 294 aaKnown RBP11.38□□□□□ -0.59
GTF3A-209ENST00000640289 C6orf52Q5T4I8 152 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 IZUMO2Q6UXV1 221 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 RFPL4BQ6ZWI9 263 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 NAA40Q86UY6 237 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 RFLNBQ8N5W9 214 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 CNIH3Q8TBE1 160 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 THEM6Q8WUY1 208 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 TFAP2CQ92754 450 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 C4orf45Q96LM5 186 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 YIPF3Q9GZM5 350 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 VCX3BQ9H321 246 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 AMBNQ9NP70 447 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 HAO2Q9NYQ3 351 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 ATPIF1Q9UII2 106 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 LAMP5Q9UJQ1 280 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 PLEKHA6Q9Y2H5 1048 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 GRIP1Q9Y3R0 1128 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 FBN2P35556 2912 aa11.38□□□□□ -0.59
GTF3A-209ENST00000640289 PRR32B1ATL7 298 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 ZNF878C9JN71 531 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 H0YJX3 145 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 WBP4O75554 376 aaKnown RBP11.37□□□□□ -0.59
GTF3A-209ENST00000640289 ABHD16AO95870 558 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 LCKP06239 509 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 ALOX5APP20292 161 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 ANOS1P23352 680 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 PCSK6P29122 969 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 APOBEC3AP31941 199 aaPredicted RBP11.37□□□□□ -0.59
GTF3A-209ENST00000640289 TTKP33981 857 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 ISL1P61371 349 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 ADIPOQQ15848 244 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 KRTAP27-1Q3LI81 207 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 SPATA46Q5T0L3 261 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms