RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 OR4C15Q8NGM1 316 aa15.06■□□□□ 0
PNKP-230ENST00000638016 C1orf159Q96HA4 380 aa15.06■□□□□ 0
PNKP-230ENST00000638016 NSL1Q96IY1 281 aa15.06■□□□□ 0
PNKP-230ENST00000638016 CLPTM1LQ96KA5 538 aa15.06■□□□□ 0
PNKP-230ENST00000638016 PLA2G12AQ9BZM1 189 aa15.06■□□□□ 0
PNKP-230ENST00000638016 SAP30LQ9HAJ7 183 aa15.06■□□□□ 0
PNKP-230ENST00000638016 RPRD1BQ9NQG5 326 aaKnown RBP15.06■□□□□ 0
PNKP-230ENST00000638016 NDE1Q9NXR1 346 aa15.06■□□□□ 0
PNKP-230ENST00000638016 NKIRAS2Q9NYR9 191 aa15.06■□□□□ 0
PNKP-230ENST00000638016 ACTR3BQ9P1U1 418 aa15.06■□□□□ 0
PNKP-230ENST00000638016 LPAR3Q9UBY5 353 aa15.06■□□□□ 0
PNKP-230ENST00000638016 B9D1Q9UPM9 204 aa15.06■□□□□ 0
PNKP-230ENST00000638016 POLR1DQ9Y2S0 133 aa15.06■□□□□ 0
PNKP-230ENST00000638016 STARD10Q9Y365 291 aa15.06■□□□□ 0
PNKP-230ENST00000638016 LHFPL6Q9Y693 200 aa15.06■□□□□ 0
PNKP-230ENST00000638016 OR6C6A6NF89 314 aa15.05■□□□□ -0
PNKP-230ENST00000638016 PHF1O43189 567 aaPredicted RBP15.05■□□□□ -0
PNKP-230ENST00000638016 FAM107AO95990 144 aa15.05■□□□□ -0
PNKP-230ENST00000638016 IFNA2P01563 188 aa15.05■□□□□ -0
PNKP-230ENST00000638016 COX5BP10606 129 aa15.05■□□□□ -0
PNKP-230ENST00000638016 SRD5A1P18405 259 aa15.05■□□□□ -0
PNKP-230ENST00000638016 PRSS12P56730 875 aa15.05■□□□□ -0
PNKP-230ENST00000638016 LMO4P61968 165 aa15.05■□□□□ -0
PNKP-230ENST00000638016 MRPS11P82912 194 aaKnown RBP15.05■□□□□ -0
PNKP-230ENST00000638016 PCGF3Q3KNV8 242 aa15.05■□□□□ -0
PNKP-230ENST00000638016 JAZF1Q86VZ6 243 aa15.05■□□□□ -0
PNKP-230ENST00000638016 LINC00346Q8IVM7 164 aa15.05■□□□□ -0
PNKP-230ENST00000638016 OR8D4Q8NGM9 314 aa15.05■□□□□ -0
PNKP-230ENST00000638016 GNPDA2Q8TDQ7 276 aa15.05■□□□□ -0
PNKP-230ENST00000638016 ELOVL3Q9HB03 270 aa15.05■□□□□ -0
PNKP-230ENST00000638016 DECR2Q9NUI1 292 aa15.05■□□□□ -0
PNKP-230ENST00000638016 TMCC3Q9ULS5 477 aa15.05■□□□□ -0
PNKP-230ENST00000638016 WNK2Q9Y3S1 2297 aa15.05■□□□□ -0
PNKP-230ENST00000638016 PLSCR5A0PG75 271 aa15.04■□□□□ -0
PNKP-230ENST00000638016 OR6C68A6NDL8 312 aa15.04■□□□□ -0
PNKP-230ENST00000638016 RNF212BA8MTL3 300 aa15.04■□□□□ -0
PNKP-230ENST00000638016 TNFRSF11BO00300 401 aa15.04■□□□□ -0
PNKP-230ENST00000638016 ARPC3O15145 178 aa15.04■□□□□ -0
PNKP-230ENST00000638016 TIMM8AO60220 97 aaPredicted RBP15.04■□□□□ -0
PNKP-230ENST00000638016 TFP02787 698 aa15.04■□□□□ -0
PNKP-230ENST00000638016 CRYBB2P43320 205 aa15.04■□□□□ -0
PNKP-230ENST00000638016 ARHGDIAP52565 204 aa15.04■□□□□ -0
PNKP-230ENST00000638016 TMEM33P57088 247 aa15.04■□□□□ -0
PNKP-230ENST00000638016 LSM6P62312 80 aaKnown RBP15.04■□□□□ -0
PNKP-230ENST00000638016 TSPAN31Q12999 210 aa15.04■□□□□ -0
PNKP-230ENST00000638016 HLXQ14774 488 aaPredicted RBP15.04■□□□□ -0
PNKP-230ENST00000638016 KCNMB1Q16558 191 aa15.04■□□□□ -0
PNKP-230ENST00000638016 Q6ZR03 302 aa15.04■□□□□ -0
PNKP-230ENST00000638016 PHC2Q8IXK0 858 aa15.04■□□□□ -0
PNKP-230ENST00000638016 CCDC197Q8NCU1 140 aa15.04■□□□□ -0
PNKP-230ENST00000638016 OR52E2Q8NGJ4 325 aa15.04■□□□□ -0
PNKP-230ENST00000638016 OR1F12Q8NHA8 337 aa15.04■□□□□ -0
PNKP-230ENST00000638016 ZNRF4Q8WWF5 429 aa15.04■□□□□ -0
PNKP-230ENST00000638016 CCDC124Q96CT7 223 aaKnown RBP15.04■□□□□ -0
PNKP-230ENST00000638016 KLHL21Q9UJP4 597 aa15.04■□□□□ -0
PNKP-230ENST00000638016 PURGQ9UJV8 347 aaKnown RBP15.04■□□□□ -0
PNKP-230ENST00000638016 WIPI2Q9Y4P8 454 aa15.04■□□□□ -0
PNKP-230ENST00000638016 GASTP01350 101 aa15.03■□□□□ -0
PNKP-230ENST00000638016 MT-ND5P03915 603 aa15.03■□□□□ -0
PNKP-230ENST00000638016 PSKH1P11801 424 aa15.03■□□□□ -0
PNKP-230ENST00000638016 RPS27P42677 84 aaKnown RBP15.03■□□□□ -0
PNKP-230ENST00000638016 MAGEA2P43356 314 aa15.03■□□□□ -0
PNKP-230ENST00000638016 MTX3Q5HYI7 312 aa15.03■□□□□ -0
PNKP-230ENST00000638016 ZNF770Q6IQ21 691 aaPredicted RBP15.03■□□□□ -0
PNKP-230ENST00000638016 LCN8Q6JVE9 175 aa15.03■□□□□ -0
PNKP-230ENST00000638016 LYPD4Q6UWN0 246 aa15.03■□□□□ -0
PNKP-230ENST00000638016 CFAP77Q6ZQR2 320 aa15.03■□□□□ -0
PNKP-230ENST00000638016 OR5AS1Q8N127 324 aa15.03■□□□□ -0
PNKP-230ENST00000638016 CYB561A3Q8NBI2 242 aa15.03■□□□□ -0
PNKP-230ENST00000638016 SLC26A10Q8NG04 563 aa15.03■□□□□ -0
PNKP-230ENST00000638016 CCL17Q92583 94 aa15.03■□□□□ -0
PNKP-230ENST00000638016 CMBLQ96DG6 245 aa15.03■□□□□ -0
PNKP-230ENST00000638016 WACQ9BTA9 647 aa15.03■□□□□ -0
PNKP-230ENST00000638016 TBCCD1Q9NVR7 557 aa15.03■□□□□ -0
PNKP-230ENST00000638016 PTTG3PQ9NZH4 202 aa15.03■□□□□ -0
PNKP-230ENST00000638016 TMEFF2Q9UIK5 374 aaPredicted RBP15.03■□□□□ -0
PNKP-230ENST00000638016 U3KQV3 271 aa15.03■□□□□ -0
PNKP-230ENST00000638016 DYSFO75923 2080 aa15.03■□□□□ -0
PNKP-230ENST00000638016 STAB1Q9NY15 2570 aa15.03■□□□□ -0
PNKP-230ENST00000638016 UBOX5O94941 541 aa15.02■□□□□ -0
PNKP-230ENST00000638016 RENP00797 406 aa15.02■□□□□ -0
PNKP-230ENST00000638016 ANOS1P23352 680 aa15.02■□□□□ -0
PNKP-230ENST00000638016 NOS3P29474 1203 aa15.02■□□□□ -0
PNKP-230ENST00000638016 CRABP1P29762 137 aa15.02■□□□□ -0
PNKP-230ENST00000638016 PYCR1P32322 319 aa15.02■□□□□ -0
PNKP-230ENST00000638016 HMGA2P52926 109 aa15.02■□□□□ -0
PNKP-230ENST00000638016 HIST1H3AP68431 136 aa15.02■□□□□ -0
PNKP-230ENST00000638016 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.02■□□□□ -0
PNKP-230ENST00000638016 MOGQ16653 247 aa15.02■□□□□ -0
PNKP-230ENST00000638016 RSPO1Q2MKA7 263 aaPredicted RBP15.02■□□□□ -0
PNKP-230ENST00000638016 SPATS1Q496A3 300 aa15.02■□□□□ -0
PNKP-230ENST00000638016 FAM209AQ5JX71 171 aa15.02■□□□□ -0
PNKP-230ENST00000638016 HIST2H3PS2Q5TEC6 136 aa15.02■□□□□ -0
PNKP-230ENST00000638016 DNM1P34Q6PK57 102 aa15.02■□□□□ -0
PNKP-230ENST00000638016 UNQ6126/PRO20091Q6UXV3 157 aa15.02■□□□□ -0
PNKP-230ENST00000638016 HIST2H3AQ71DI3 136 aa15.02■□□□□ -0
PNKP-230ENST00000638016 DHFR2Q86XF0 187 aa15.02■□□□□ -0
PNKP-230ENST00000638016 AQP11Q8NBQ7 271 aa15.02■□□□□ -0
PNKP-230ENST00000638016 NPEPL1Q8NDH3 523 aa15.02■□□□□ -0
PNKP-230ENST00000638016 WDR76Q9H967 626 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms