RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 DGUOKQ16854 277 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 OR7E24Q6IFN5 339 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 CFAP77Q6ZQR2 320 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 LINGO2Q7L985 606 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 ZNF100Q8IYN0 542 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 GJC3Q8NFK1 279 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 OR2G2Q8NGZ5 317 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 TMEM203Q969S6 136 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 DACH2Q96NX9 599 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 SLX1AQ9BQ83 275 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 SLC7A10Q9NS82 523 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 CLEC4AQ9UMR7 237 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 R4GMQ9 66 aa13.51□□□□□ -0.25
CLN6-219ENST00000637329 PTPRQQ9UMZ3 2332 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 ZNF407Q9C0G0 2248 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 MBD3L4A6NDZ8 208 aaPredicted RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 MBD3L3A6NE82 208 aaPredicted RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 MBD3L5A6NJ08 208 aaPredicted RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 SRSF10O75494 262 aaKnown RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 GATBO75879 557 aaKnown RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 RPP14O95059 124 aaKnown RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 FARS2O95363 451 aaKnown RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 CNOT4O95628 575 aaKnown RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 WNT11O96014 354 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 IL1AP01583 271 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 CRHP06850 196 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 MAPK3P27361 379 aaPredicted RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 MMP16P51512 607 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 TDGF1P3P51864 188 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 PSMA6P60900 246 aaKnown RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 PCBD1P61457 104 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 SCRN3Q0VDG4 424 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 OTPQ5XKR4 325 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 C22orf42Q6IC83 251 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 KLHL24Q6TFL4 600 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 LINC00299Q6ZSB3 139 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 FAM214BQ7L5A3 538 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 CATSPERDQ86XM0 798 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 OR10S1Q8NGN2 331 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 OR5M9Q8NGP3 310 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 OR6K3Q8NGY3 331 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 OR5AK2Q8NH90 309 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 MBD3L2Q8NHZ7 208 aaPredicted RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 HSD17B8Q92506 261 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 ZFP3Q96NJ6 502 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 HDHD2Q9H0R4 259 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 ZNF71Q9NQZ8 489 aaPredicted RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 UPB1Q9UBR1 384 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 ATPIF1Q9UII2 106 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 ZNF281Q9Y2X9 895 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 A3GALT2U3KPV4 340 aa13.5□□□□□ -0.25
CLN6-219ENST00000637329 SPENQ96T58 3664 aaKnown RBP13.5□□□□□ -0.25
CLN6-219ENST00000637329 OR4C45A6NMZ5 311 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 ARL6IP5O75915 188 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 ZFPL1O95159 310 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 HSD11B1P28845 292 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 SOX6P35712 828 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 LSAMPQ13449 338 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 CORO6Q6QEF8 472 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 PLXDC2Q6UX71 529 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 TMEM91Q6ZNR0 172 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 NUFIP2Q7Z417 695 aaKnown RBP13.49□□□□□ -0.25
CLN6-219ENST00000637329 DPPA2Q7Z7J5 298 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 SLC22A24Q8N4F4 322 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 TEX19Q8NA77 164 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 FAM57AQ8TBR7 257 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 ZNF837Q96EG3 531 aaPredicted RBP13.49□□□□□ -0.25
CLN6-219ENST00000637329 HDHD5Q9BXW7 423 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 PNRC2Q9NPJ4 139 aaKnown RBP13.49□□□□□ -0.25
CLN6-219ENST00000637329 GALNT8Q9NY28 637 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 FRRS1LQ9P0K9 344 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 LUZP4Q9P127 313 aa13.49□□□□□ -0.25
CLN6-219ENST00000637329 MGAQ8IWI9 3026 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 ZNF879B4DU55 563 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 LOC110117498-PIK3R3F6TDL0 507 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 LRRTM2O43300 516 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 WISP2O76076 250 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 APOC1P02654 83 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 UBCP0CG48 685 aaKnown RBP13.48□□□□□ -0.25
CLN6-219ENST00000637329 CD8BP10966 210 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 SFTPCP11686 197 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 B4GALT1P15291 398 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 CTSSP25774 331 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 TGFBR1P36897 503 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 KIR3DL2P43630 455 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 MTNR1BP49286 362 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 ECH1Q13011 328 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 RAB35Q15286 201 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 WDR38Q5JTN6 314 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 C1orf185Q5T7R7 199 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 FBXW9Q5XUX1 488 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 ZNF813Q6ZN06 617 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 PRSS35Q8N3Z0 413 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 ZNF676Q8N7Q3 588 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 IL17RDQ8NFM7 739 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 ABHD4Q8TB40 342 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 DCLRE1CQ96SD1 692 aaKnown RBP13.48□□□□□ -0.25
CLN6-219ENST00000637329 ATF6BQ99941 703 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 PDCD1LG2Q9BQ51 273 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms