RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 DISC1C4P0D8 188 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 PLPP3O14495 311 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 RAD1O60671 282 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 CD34P28906 385 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 ARRB1P49407 418 aaPredicted RBP13.03□□□□□ -0.32
CLN6-215ENST00000636674 VWA2Q5GFL6 755 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 C1orf140Q5VVS0 124 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 DEGS2Q6QHC5 323 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 ZNF704Q6ZNC4 412 aaPredicted RBP13.03□□□□□ -0.32
CLN6-215ENST00000636674 MARCH3Q86UD3 253 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 SLC25A42Q86VD7 318 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 ZDHHC22Q8N966 263 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 SMRP1Q8NCR6 262 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 OR51A2Q8NGJ7 313 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 OR13C3Q8NGS6 347 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 OR6S1Q8NH40 331 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 FAM174AQ8TBP5 190 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 TSLPQ969D9 159 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 SLC25A36Q96CQ1 311 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 MVB12AQ96EY5 273 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 GAL3ST4Q96RP7 486 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 SLC38A3Q99624 504 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.03□□□□□ -0.32
CLN6-215ENST00000636674 PDE7BQ9NP56 450 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 G6PC2Q9NQR9 355 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 CGGBP1Q9UFW8 167 aaPredicted RBP13.03□□□□□ -0.32
CLN6-215ENST00000636674 LOC107986453A0A1B0GWG9 222 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 KANTRA0A1W2PQU2 76 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 H3BMH7 237 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 MBTPS2O43462 519 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 ZBTB25P24278 435 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 DNASE1L1P49184 302 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 PNLIPRP2P54317 469 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 SLC26A5P58743 744 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 ELOCQ15369 112 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 ETFDHQ16134 617 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 OTPQ5XKR4 325 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 LIN54Q6MZP7 749 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 GRINAQ7Z429 371 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 ZNF584Q8IVC4 421 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 C9orf40Q8IXQ3 194 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 OR10K1Q8NGX5 313 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 FOXN4Q96NZ1 517 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 CMKLR1Q99788 373 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 SLC6A7Q99884 636 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 COL25A1Q9BXS0 654 aaPredicted RBP13.03□□□□□ -0.32
CLN6-215ENST00000636674 TBL1XR1Q9BZK7 514 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 SOHLH2Q9NX45 425 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 ZNF230Q9UIE0 474 aaPredicted RBP13.03□□□□□ -0.32
CLN6-215ENST00000636674 PLEKHA6Q9Y2H5 1048 aa13.03□□□□□ -0.32
CLN6-215ENST00000636674 VCANP13611 3396 aa13.02□□□□□ -0.32
CLN6-215ENST00000636674 IGHV5-51A0A0C4DH38 117 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 RNF222A6NCQ9 220 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 NPIPB13A6NJU9 1138 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 NPIPB4C9JG80 1138 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 HLA-AP01891 365 aaKnown RBP13.02□□□□□ -0.33
CLN6-215ENST00000636674 FCER2P06734 321 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 PLCXD2Q0VAA5 305 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 MOGAT2Q3SYC2 334 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 ZNF260Q3ZCT1 412 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 TMEM244Q5VVB8 128 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 FAHD2BQ6P2I3 314 aaPredicted RBP13.02□□□□□ -0.33
CLN6-215ENST00000636674 POMZP3Q6PJE2 187 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 CFAP77Q6ZQR2 320 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 MDGA2Q7Z553 956 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 LYG2Q86SG7 212 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 SLC26A10Q8NG04 563 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 ST7LQ8TDW4 575 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 KLHDC7BQ96G42 594 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 FAHD2AQ96GK7 314 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 NKX3-1Q99801 234 aaPredicted RBP13.02□□□□□ -0.33
CLN6-215ENST00000636674 WDR13Q9H1Z4 485 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 ZC4H2Q9NQZ6 224 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 CUTCQ9NTM9 273 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 COMMD9Q9P000 198 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 GDF2Q9UK05 429 aaPredicted RBP13.02□□□□□ -0.33
CLN6-215ENST00000636674 OR52A1Q9UKL2 312 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 VSIG4Q9Y279 399 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 FREM3P0C091 2139 aa13.02□□□□□ -0.33
CLN6-215ENST00000636674 A0A1W2PPC4 97 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 CPED1A4D0V7 1026 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 A6NIZ1 184 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 FTCDNL1E5RQL4 147 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 ATP6V1G2-DDX39BF2Z307 99 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 OR2T1O43869 369 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 TSPAN9O75954 239 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 WISP1O95388 367 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 AHSA1O95433 338 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 NUDT14O95848 222 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 GFERP55789 205 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 RAP1BP61224 184 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 RAP1AP62834 184 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 SMAD2Q15796 467 aaKnown RBP13.01□□□□□ -0.33
CLN6-215ENST00000636674 DNM1P34Q6PK57 102 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 ACOT7LQ6ZUV0 252 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 TMEM17Q86X19 198 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 RELL2Q8NC24 303 aaPredicted RBP13.01□□□□□ -0.33
CLN6-215ENST00000636674 GPR119Q8TDV5 335 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 MITD1Q8WV92 249 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 ZBTB8AQ96BR9 441 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms