RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 CXCL13O43927 109 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 DFFBO76075 338 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 HEXAP06865 529 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 ZGLP1P0C6A0 271 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 ALOX5APP20292 161 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 CD276Q5ZPR3 534 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 TCTN3Q6NUS6 607 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 PLXDC2Q6UX71 529 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 FBXL6Q8N531 539 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 CDCA4Q9BXL8 241 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 SCPEP1Q9HB40 452 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 PROCRQ9UNN8 238 aa11.66□□□□□ -0.54
SCN8A-209ENST00000627620 C2CD4DB7Z1M9 353 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 GPX5O75715 221 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 RFX2P48378 723 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 RHOUQ7L0Q8 258 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 CPEB3Q8NE35 698 aaKnown RBP11.65□□□□□ -0.54
SCN8A-209ENST00000627620 GPR84Q9NQS5 396 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 PURGQ9UJV8 347 aaKnown RBP11.65□□□□□ -0.54
SCN8A-209ENST00000627620 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 PRSS37A4D1T9 235 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 ANKRD61A6NGH8 418 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 FZD6O60353 706 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 CTXN2P0C2S0 81 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 POU3F3P20264 500 aaPredicted RBP11.65□□□□□ -0.54
SCN8A-209ENST00000627620 GABRA4P48169 554 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 LHX8Q68G74 356 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 ASTLQ6HA08 431 aaPredicted RBP11.65□□□□□ -0.54
SCN8A-209ENST00000627620 CMTM2Q8TAZ6 248 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 KCNE4Q8WWG9 221 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 SARAFQ96BY9 339 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 TXN2Q99757 166 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 ZNF195O14628 629 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 MAGEB4O15481 346 aaPredicted RBP11.65□□□□□ -0.54
SCN8A-209ENST00000627620 TNFSF15O95150 251 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 CLEC3BP05452 202 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 HPNP05981 417 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 PNLIPRP2P54317 469 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 GP2P55259 537 aaKnown RBP11.65□□□□□ -0.54
SCN8A-209ENST00000627620 SPEM1Q8N4L4 309 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 TPPP3Q9BW30 176 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 MFRPQ9BY79 579 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 BOLA1Q9Y3E2 137 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 TSTD3H0UI37 97 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 MGST1P10620 155 aaKnown RBP11.65□□□□□ -0.54
SCN8A-209ENST00000627620 CLDN15P56746 228 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 ARL16Q0P5N6 197 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 FAM53BQ14153 422 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 S1PR5Q9H228 398 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 RIMS4Q9H426 269 aaPredicted RBP11.65□□□□□ -0.54
SCN8A-209ENST00000627620 ATP23Q9Y6H3 246 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 CACNA1SQ13698 1873 aa11.65□□□□□ -0.54
SCN8A-209ENST00000627620 IGHV3-15A0A0B4J1V0 119 aa11.65□□□□□ -0.55
SCN8A-209ENST00000627620 SMIM18P0DKX4 95 aa11.65□□□□□ -0.55
SCN8A-209ENST00000627620 RPS27P42677 84 aaKnown RBP11.65□□□□□ -0.55
SCN8A-209ENST00000627620 PSMB3P49720 205 aa11.65□□□□□ -0.55
SCN8A-209ENST00000627620 BTG1P62324 171 aa11.65□□□□□ -0.55
SCN8A-209ENST00000627620 ANKRD34AQ69YU3 496 aa11.65□□□□□ -0.55
SCN8A-209ENST00000627620 KMT5CQ86Y97 462 aa11.65□□□□□ -0.55
SCN8A-209ENST00000627620 OR10R2Q8NGX6 335 aa11.65□□□□□ -0.55
SCN8A-209ENST00000627620 SLCO4A1Q96BD0 722 aa11.65□□□□□ -0.55
SCN8A-209ENST00000627620 NIPSNAP3BQ9BS92 247 aa11.65□□□□□ -0.55
SCN8A-209ENST00000627620 ZNF2Q9BSG1 426 aaPredicted RBP11.65□□□□□ -0.55
SCN8A-209ENST00000627620 MAST2Q6P0Q8 1798 aa11.65□□□□□ -0.55
SCN8A-209ENST00000627620 TCRBV5S2A0A599 114 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 SIRPB1O00241 398 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 SH2D1BO14796 132 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 NKX2-1P43699 371 aaPredicted RBP11.64□□□□□ -0.55
SCN8A-209ENST00000627620 RNF4P78317 190 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 EGR3Q06889 387 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 CLN3Q13286 438 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 ZNF626Q68DY1 528 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 LAIR1Q6GTX8 287 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 TMUB2Q71RG4 321 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 UBALD2Q8IYN6 164 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 C15orf54Q8N8G6 183 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 OR2AE1Q8NHA4 323 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 YIPF5Q969M3 257 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 MRGPRX4Q96LA9 322 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 WSB2Q9NYS7 404 aaPredicted RBP11.64□□□□□ -0.55
SCN8A-209ENST00000627620 ADAMTSL3P82987 1691 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 FRG2CA6NGY1 282 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 TNFSF11O14788 317 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 SCGB1D1O95968 90 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 PCSK6P29122 969 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 PRAMEF5Q5TYX0 476 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 PRAMEF6Q5VXH4 476 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 LHFPL2Q6ZUX7 228 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 SAT2Q96F10 170 aaPredicted RBP11.64□□□□□ -0.55
SCN8A-209ENST00000627620 ARRDC1-AS1Q9H2J1 176 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 TXNIPQ9H3M7 391 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 GNB4Q9HAV0 340 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 BTAF1O14981 1849 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 ALS2Q96Q42 1657 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 ARPC4-TTLL3A0A0A6YYG9 625 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 DGCR2P98153 550 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 C9orf50Q5SZB4 431 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 SPACA5Q96QH8 159 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 SLX4Q8IY92 1834 aa11.64□□□□□ -0.55
SCN8A-209ENST00000627620 ST8SIA3O43173 380 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms