RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TAAR9Q96RI9 348 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 MCUBQ9NWR8 336 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 TAS2R4Q9NYW5 299 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 RCE1Q9Y256 329 aa17.53■□□□□ 0.4
PCDHB11-202ENST00000624887 MED12Q93074 2177 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 A0A0A6YYJ9 748 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 OR2M5A3KFT3 312 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 ZNF726A6NNF4 738 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 G3V3Y1 287 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 ACOT7O00154 380 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 POU3F4P49335 361 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 CCR6P51684 374 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 RAG2P55895 527 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 MFAP5Q13361 173 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 SSPNQ14714 243 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 C6orf183Q5T699 404 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 RAET1LQ5VY80 246 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 CARD17Q5XLA6 110 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 NOXA1Q86UR1 476 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 PLPP7Q8NBV4 271 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 FAM3DQ96BQ1 224 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 JSRP1Q96MG2 331 aaPredicted RBP17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 SEC61A2Q9H9S3 476 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 KLK11Q9UBX7 282 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 GDF2Q9UK05 429 aaPredicted RBP17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 DKKL1Q9UK85 242 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 CDV3Q9UKY7 258 aaKnown RBP17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 LHFPL6Q9Y693 200 aa17.52■□□□□ 0.4
PCDHB11-202ENST00000624887 LOC100289279A0A1B0GTE1 492 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 CBR3O75828 277 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 ZNF17P17021 662 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 EIF1AXP47813 144 aaKnown RBP17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 NUBP1P53384 320 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 Q0VFX4 171 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 C2orf76Q3KRA6 126 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 KLHL24Q6TFL4 600 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 UTS2BQ765I0 119 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 BTN2A1Q7KYR7 527 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 GHITMQ9H3K2 345 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 HRASLSQ9HDD0 168 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 SLC17A5Q9NRA2 495 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 ING3Q9NXR8 418 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 PMS2P1A4D2B8 440 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 MEGF11A6BM72 1044 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 NAP1L6A6NFF2 107 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 CDX4O14627 284 aaPredicted RBP17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 DOK2O60496 412 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 EIF1BO60739 113 aaKnown RBP17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 CTAG2O75638 210 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 HPP00738 406 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 DNASE1L1P49184 302 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 MRPS15P82914 257 aaKnown RBP17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 CFAP77Q6ZQR2 320 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 RHOUQ7L0Q8 258 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 DDA1Q9BW61 102 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 EMC7Q9NPA0 242 aa17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 MRPL15Q9P015 296 aaKnown RBP17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 FARSAQ9Y285 508 aaKnown RBP17.51■□□□□ 0.39
PCDHB11-202ENST00000624887 LOC101059948A0A1B0GTJ6 334 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 ANKRD20A5PA0PJZ0 165 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 TLX3O43711 291 aaPredicted RBP17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 YES1P07947 543 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 QDPRP09417 244 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 ZNF806P0C7X5 589 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 CDAP32320 146 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 EFNB2P52799 333 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 KCNMB1Q16558 191 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 CCDC157Q569K6 752 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 ELMOD2Q8IZ81 293 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 SLC25A28Q96A46 364 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 SPRY4Q9C004 299 aa17.5■□□□□ 0.39
PCDHB11-202ENST00000624887 GGT3PA6NGU5 568 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 P2RY10O00398 339 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 ACSM4P0C7M7 580 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 PTHLHP12272 177 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 CD59P13987 128 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 CLDN17P56750 224 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 H3F3CQ6NXT2 135 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 OR2AJ1Q8NGZ0 328 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 PIGQQ9BRB3 760 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 ACTR6Q9GZN1 396 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 DIABLOQ9NR28 239 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 POLR1DQ9Y2S0 133 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 PHF3Q92576 2039 aaKnown RBP17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 TTC28Q96AY4 2481 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 ZNF878C9JN71 531 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 GMDSO60547 372 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 VAMP5O95183 116 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 TTRP02766 147 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 H2AFB2P0C5Z0 115 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 JMJD7P0C870 316 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 NR2C1P13056 603 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 HTR2CP28335 458 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 RAC1P63000 192 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 LIX1LQ8IVB5 337 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 OR51A2Q8NGJ7 313 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 OR56B4Q8NH76 319 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 PBOV1Q9GZY1 135 aa17.49■□□□□ 0.39
PCDHB11-202ENST00000624887 TMEM272A0A1B0GTI8 110 aa17.48■□□□□ 0.39
PCDHB11-202ENST00000624887 P04436 131 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms