RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 METTL12A8MUP2 240 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 A8MVM7 634 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 TMEM14DPA8MWL7 114 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 B8ZZF3 427 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 I3L521 148 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 L7N2F9 121 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 M0QYG6 137 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 RAB27BO00194 218 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 SULT2B1O00204 365 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 TRAF3IP2O43734 574 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 SSX5O60225 188 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 SLC16A7O60669 478 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 RAD1O60671 282 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 SDC3O75056 442 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ZNF217O75362 1048 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 TOXO94900 526 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 MPZL1O95297 269 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 AHSA1O95433 338 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 PMS2P2O95744 297 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ONECUT2O95948 504 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 IGLV3-1P01715 115 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 TTRP02766 147 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ISG15P05161 165 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 HOXD4P09016 255 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 SPARCP09486 303 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 GTF2F2P13984 249 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 FOLR1P15328 257 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 RPA2P15927 270 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 PPP3CBP16298 524 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 NAGAP17050 411 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 HLA-GP17693 338 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 NAT1P18440 290 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 RAB6AP20340 208 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 BCKDHBP21953 392 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 CCL1P22362 96 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 NFYAP23511 347 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 ZBTB25P24278 435 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 CXCR1P25024 350 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 HTR2CP28335 458 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 IL12BP29460 328 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 HOXD11P31277 338 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 S100A11P31949 105 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 CCKBRP32239 447 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 PRSS3P35030 304 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ARRB1P49407 418 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 CENPAP49450 140 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 RIDAP52758 137 aaKnown RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 SUMO3P55854 103 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 TAS2R19P59542 299 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 GPR85P60893 370 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 PSMA6P60900 246 aaKnown RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 RNF4P78317 190 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 OC90Q02509 493 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 PMPCAQ10713 525 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 FOXF1Q12946 379 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 EIF2B1Q14232 305 aaKnown RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 SHBQ15464 509 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ZNF239Q16600 458 aaKnown RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 ODF4Q2M2E3 257 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 PLPPR5Q32ZL2 321 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 C2orf76Q3KRA6 126 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ZNF260Q3ZCT1 412 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 SMUG1Q53HV7 270 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 OR10K2Q6IF99 312 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 SLC18B1Q6NT16 456 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 STEAP1BQ6NZ63 245 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 TSSK4Q6SA08 328 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 C3P1Q6ZMU1 363 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ZNF813Q6ZN06 617 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 C16orf47Q6ZP98 133 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 CHMP1BQ7LBR1 199 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 HDDC2Q7Z4H3 204 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ANKRD37Q7Z713 158 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 DTX1Q86Y01 620 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 LINC00346Q8IVM7 164 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 NAXDQ8IW45 347 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 SDR16C5Q8N3Y7 309 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 EIF4E3Q8N5X7 224 aaKnown RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 PLPP7Q8NBV4 271 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 GALNT11Q8NCW6 608 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 TSTD1Q8NFU3 115 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 OR4D6Q8NGJ1 314 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 OR1J2Q8NGS2 313 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 OR1S1Q8NH92 325 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 MFSD8Q8NHS3 518 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ZNF563Q8TA94 476 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 SUN5Q8TC36 379 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 DUSP19Q8WTR2 217 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 SCARB1Q8WTV0 552 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 METTL21AQ8WXB1 218 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ASB13Q8WXK3 278 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ST8SIA1Q92185 356 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 DVL3Q92997 716 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 RBPMSQ93062 196 aaKnown RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 SLC25A36Q96CQ1 311 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 CLIP3Q96DZ5 547 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ARL5BQ96KC2 179 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 SLC38A3Q99624 504 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 SLC6A7Q99884 636 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 GSX2Q9BZM3 304 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms