RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 TIMM8AO60220 97 aaPredicted RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 ABHD16AO95870 558 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 CD55P08174 381 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 ADH4P08319 380 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 CD14P08571 375 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 GSTP1P09211 210 aaKnown RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 ANOS1P23352 680 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 RPL4P36578 427 aaKnown RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 RAP1BP61224 184 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 RAP1AP62834 184 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 ACTG1P63261 375 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 TNFAIP6P98066 277 aaPredicted RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 HOXA4Q00056 320 aaPredicted RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 TEKQ02763 1124 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 CDK5R2Q13319 367 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 KRR1Q13601 381 aaKnown RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 HLXQ14774 488 aaPredicted RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 ZMYND11Q15326 602 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 MEP1BQ16820 701 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 CCDC92Q53HC0 331 aaPredicted RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 MTX3Q5HYI7 312 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 DCAF12L2Q5VW00 463 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 FAM205BPQ63HN1 556 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 C1orf94Q6P1W5 598 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 C12orf54Q6X4T0 127 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 TMPRSS11FQ6ZWK6 438 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 OR5AS1Q8N127 324 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 DEFB108BQ8NET1 73 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 OR4M2Q8NGB6 313 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 ITLN1Q8WWA0 313 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 TAF15Q92804 592 aaKnown RBP eCLIP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 RAB1CQ92928 201 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 TSSK2Q96PF2 358 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 SYT4Q9H2B2 425 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 NMNAT1Q9HAN9 279 aaPredicted RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 ARGLU1Q9NWB6 273 aaPredicted RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 PURGQ9UJV8 347 aaKnown RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 PCDHB10Q9UN67 800 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 COA3Q9Y2R0 106 aaPredicted RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 SOX21Q9Y651 276 aaPredicted RBP9.64□□□□□ -0.87
CPNE3-210ENST00000621245 IGHV3-64DA0A0J9YX35 117 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 GMNCA6NCL1 334 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 OR6C6A6NF89 314 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 C12orf71A8MTZ7 269 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 SOCS2O14508 198 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 SGCEO43556 437 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 PTP4A3O75365 173 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 ZNF205O95201 554 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 MT-ND5P03915 603 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 SELEP16581 610 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 OMPP47874 163 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 ZBED5Q49AG3 693 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 KLF17Q5JT82 389 aaPredicted RBP9.63□□□□□ -0.87
CPNE3-210ENST00000621245 BCL6BQ8N143 479 aaPredicted RBP9.63□□□□□ -0.87
CPNE3-210ENST00000621245 FAM156AQ8NDB6 213 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 OR2Z1Q8NG97 314 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 OR10AD1Q8NGE0 317 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 ZNF418Q8TF45 676 aaPredicted RBP9.63□□□□□ -0.87
CPNE3-210ENST00000621245 LZICQ8WZA0 190 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 DVL3Q92997 716 aaPredicted RBP9.63□□□□□ -0.87
CPNE3-210ENST00000621245 CMBLQ96DG6 245 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 TIMD4Q96H15 378 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 C1orf147Q96MC9 270 aaPredicted RBP9.63□□□□□ -0.87
CPNE3-210ENST00000621245 DUX5Q96PT3 197 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 FUZQ9BT04 418 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 RERGLQ9H628 205 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 CCDC134Q9H6E4 229 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 TMEM106BQ9NUM4 274 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 PTTG3PQ9NZH4 202 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 NDUFAF4Q9P032 175 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 ASH2LQ9UBL3 628 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 SIGLEC7Q9Y286 467 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 NPTNQ9Y639 398 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 ENPP4Q9Y6X5 453 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 V9GYQ6 96 aa9.63□□□□□ -0.87
CPNE3-210ENST00000621245 ELOA3CA0A087WX78 387 aaPredicted RBP9.62□□□□□ -0.87
CPNE3-210ENST00000621245 A0A0A6YYJ9 748 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 TMEM89A2RUT3 159 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 F5H0A9 414 aaPredicted RBP9.62□□□□□ -0.87
CPNE3-210ENST00000621245 H0YL77 283 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 H3BSA7 217 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 GSTA4O15217 222 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 RER1O15258 196 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 SLC16A7O60669 478 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 PPP1R3DO95685 299 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 SBK2P0C263 348 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 NR2C1P13056 603 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 KITLGP21583 273 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 CDKN2AP42771 156 aaKnown RBP9.62□□□□□ -0.87
CPNE3-210ENST00000621245 NUDT2P50583 147 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 PCBD1P61457 104 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 RSPO1Q2MKA7 263 aaPredicted RBP9.62□□□□□ -0.87
CPNE3-210ENST00000621245 FGD3Q5JSP0 725 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 CORO6Q6QEF8 472 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 RNF148Q8N7C7 305 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 ZNF283Q8N7M2 679 aa9.62□□□□□ -0.87
CPNE3-210ENST00000621245 RP9Q8TA86 221 aaKnown RBP9.62□□□□□ -0.87
CPNE3-210ENST00000621245 ZNF420Q8TAQ5 688 aaPredicted RBP9.62□□□□□ -0.87
CPNE3-210ENST00000621245 FAM216AQ8WUB2 273 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms