RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 KCTD18Q6PI47 426 aaPredicted RBP17.56■□□□□ 0.4
PDLIM3-212ENST00000620787 HAGHLQ6PII5 290 aaPredicted RBP17.56■□□□□ 0.4
PDLIM3-212ENST00000620787 LYPD6Q86Y78 171 aa17.56■□□□□ 0.4
PDLIM3-212ENST00000620787 INO80EQ8NBZ0 244 aaPredicted RBP17.56■□□□□ 0.4
PDLIM3-212ENST00000620787 OR5AP2Q8NGF4 316 aa17.56■□□□□ 0.4
PDLIM3-212ENST00000620787 OIT3Q8WWZ8 545 aa17.56■□□□□ 0.4
PDLIM3-212ENST00000620787 PTX4Q96A99 478 aa17.56■□□□□ 0.4
PDLIM3-212ENST00000620787 PHB2Q99623 299 aa17.56■□□□□ 0.4
PDLIM3-212ENST00000620787 REV3LO60673 3130 aa17.56■□□□□ 0.4
PDLIM3-212ENST00000620787 LOC390937A0A1W2PQ73 354 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 NUDT21O43809 227 aaKnown RBP17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 WISP1O95388 367 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 DNASE1L1P49184 302 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 ZNF117Q03924 483 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 ZNF260Q3ZCT1 412 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 TMEM31Q5JXX7 168 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 RAB12Q6IQ22 244 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 OR4D6Q8NGJ1 314 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 OR13C3Q8NGS6 347 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 STOML3Q8TAV4 291 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 NXF5Q9H1B4 397 aaKnown RBP17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 MLXQ9UH92 298 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 GDF2Q9UK05 429 aaPredicted RBP17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 PCNX3Q9H6A9 2034 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 TRANK1O15050 2925 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 TRAV36DV7A0A075B6V5 113 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 MEGF11A6BM72 1044 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 C17orf51A8MQB3 221 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 FADS1O60427 444 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 LMX1BO60663 402 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 ACTL6AO96019 429 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 IL13RA1P78552 427 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 TOMM34Q15785 309 aaPredicted RBP17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 C10orf91Q5T1B1 145 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 TRAPPC6BQ86SZ2 158 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 CBLN2Q8IUK8 224 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 METTL27Q8N6F8 245 aaPredicted RBP17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 GVQW1Q8N7I0 195 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 PIK3IP1Q96FE7 263 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 RPP25Q9BUL9 199 aaKnown RBP17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 LAT2Q9GZY6 243 aa17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 VSX1Q9NZR4 365 aaPredicted RBP17.55■□□□□ 0.4
PDLIM3-212ENST00000620787 CPED1A4D0V7 1026 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 F8VVB4 439 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 F8VWA3 439 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 CXCR1P25024 350 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 ARRB1P49407 418 aaPredicted RBP17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 SLC22A6Q4U2R8 563 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 NKD1Q969G9 470 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 HHLA2Q9UM44 414 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 XIRP2A4UGR9 3374 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 LOC107986453A0A1B0GWG9 222 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 C17orf105B2RV13 164 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 RAB27BO00194 218 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 KLF8O95600 359 aaPredicted RBP17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 RAB6AP20340 208 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 RPL35P42766 123 aaKnown RBP17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 HTRA3P83110 453 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 SQSTM1Q13501 440 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 SERTAD2Q14140 314 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 OR52W1Q6IF63 320 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 Q6ZSR6 202 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 RAB11FIP2Q7L804 512 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 PARGQ86W56 976 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 ADAD2Q8NCV1 583 aaKnown RBP17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 OR52N5Q8NH56 324 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 ADAMTS18Q8TE60 1221 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 WNT2BQ93097 391 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 SLC25A36Q96CQ1 311 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 CMBLQ96DG6 245 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 FBRSQ9HAH7 460 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 TMEM100Q9NV29 134 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 EMC9Q9Y3B6 208 aa17.54■□□□□ 0.4
PDLIM3-212ENST00000620787 KIR2DS5A0A0G2JLQ3 304 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 A0A0G2JNG1 304 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 OR6C76A6NM76 312 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 EEF1E1-BLOC1S5C9J1V9 151 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 KIR2DS3K7RE56 304 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 ZNF208O43345 1280 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 STK17BO94768 372 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 NSA2O95478 260 aaKnown RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 CD79AP11912 226 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 PGAM2P15259 253 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 HSD17B7P56937 341 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 SLC37A1P57057 533 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 B2MP61769 119 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 SRSF3P84103 164 aaKnown RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 BIKQ13323 160 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 GPM6BQ13491 265 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 KIR2DS5Q14953 304 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 SGCBQ16585 318 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 DHRS7BQ6IAN0 325 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 ARMC6Q6NXE6 501 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 FAHD2BQ6P2I3 314 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 PARM1Q6UWI2 310 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 MAMDC2Q7Z304 686 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 GTPBP8Q8N3Z3 284 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 PAQR4Q8N4S7 273 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 CASTOR1Q8WTX7 329 aa17.53■□□□□ 0.4
PDLIM3-212ENST00000620787 FGF14Q92915 247 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms