RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 KRR1Q13601 381 aaKnown RBP10.08□□□□□ -0.8
UPF3B-204ENST00000619445 FHL1Q13642 323 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 C1orf229Q6ZS94 237 aaPredicted RBP10.08□□□□□ -0.8
UPF3B-204ENST00000619445 VASH1Q7L8A9 365 aaPredicted RBP10.08□□□□□ -0.8
UPF3B-204ENST00000619445 FAM122BQ7Z309 247 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 ZNF283Q8N7M2 679 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 CLDN22Q8N7P3 220 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 SGMS2Q8NHU3 365 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 GTF3AQ92664 365 aaKnown RBP10.08□□□□□ -0.8
UPF3B-204ENST00000619445 FAM162AQ96A26 154 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 RASD2Q96D21 266 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 HAVCR1Q96D42 359 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 CMTM5Q96DZ9 223 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 MSL2Q9HCI7 577 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 NRIP3Q9NQ35 241 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 DDX28Q9NUL7 540 aaKnown RBP10.08□□□□□ -0.8
UPF3B-204ENST00000619445 VSX1Q9NZR4 365 aaPredicted RBP10.08□□□□□ -0.8
UPF3B-204ENST00000619445 RHCGQ9UBD6 479 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 PPP1R3CQ9UQK1 317 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 SNX13Q9Y5W8 968 aa10.08□□□□□ -0.8
UPF3B-204ENST00000619445 J3KTA2 159 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 CDC42EP2O14613 210 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 PRSS23O95084 383 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 IGHV2-70P01814 119 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 MDH2P40926 338 aaKnown RBP10.07□□□□□ -0.8
UPF3B-204ENST00000619445 GSK3BP49841 420 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 BTG1P62324 171 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 LCN2P80188 198 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 KRT72Q14CN4 511 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 KCNMB1Q16558 191 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 MESTQ5EB52 335 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 ARMCX4Q5H9R4 360 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 CGB2Q6NT52 195 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 FBXW12Q6X9E4 464 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 DPY19L2P2Q6ZN68 376 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 LRRC28Q86X40 367 aaPredicted RBP10.07□□□□□ -0.8
UPF3B-204ENST00000619445 POU5F2Q8N7G0 328 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 GJC3Q8NFK1 279 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 OR2Z1Q8NG97 314 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 OR13G1Q8NGZ3 307 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 OR1F12Q8NHA8 337 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 SLC7A13Q8TCU3 470 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 APOBEC3DQ96AK3 386 aaPredicted RBP10.07□□□□□ -0.8
UPF3B-204ENST00000619445 Q96M85 177 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 KCTD14Q9BQ13 255 aaPredicted RBP10.07□□□□□ -0.8
UPF3B-204ENST00000619445 MRI1Q9BV20 369 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 HDHD2Q9H0R4 259 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 PATZ1Q9HBE1 687 aaKnown RBP10.07□□□□□ -0.8
UPF3B-204ENST00000619445 EMC7Q9NPA0 242 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 ARMCX1Q9P291 453 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 IL20RAQ9UHF4 553 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 SAMD4AQ9UPU9 718 aaKnown RBP10.07□□□□□ -0.8
UPF3B-204ENST00000619445 AURKCQ9UQB9 309 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 SIGLEC7Q9Y286 467 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 POLR1DQ9Y2S0 133 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 ADAM18Q9Y3Q7 739 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 ARHGAP32A7KAX9 2087 aa10.07□□□□□ -0.8
UPF3B-204ENST00000619445 LRRC30A6NM36 301 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 A8MXK9 166 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 H7C1C5 153 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 NME4O00746 187 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 SLC16A7O60669 478 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 FSTL3O95633 263 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 TXNDC12O95881 172 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 AVPP01185 164 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 FSHBP01225 129 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 SBK2P0C263 348 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 CTLA4P16410 223 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 SELEP16581 610 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 SRP9P49458 86 aaKnown RBP10.06□□□□□ -0.8
UPF3B-204ENST00000619445 LCN6P62502 163 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 ESCO2Q56NI9 601 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 FGD3Q5JSP0 725 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 C1orf87Q8N0U7 546 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 CMBLQ96DG6 245 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 SYT4Q9H2B2 425 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 ABCD2Q9UBJ2 740 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 ASH2LQ9UBL3 628 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 OR5V1Q9UGF6 321 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 LRCH1Q9Y2L9 728 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 STARD10Q9Y365 291 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 AUP1Q9Y679 476 aa10.06□□□□□ -0.8
UPF3B-204ENST00000619445 IMPA2O14732 288 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 PTP4A3O75365 173 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 PPIAL4GP0DN37 164 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 IFNGR2P38484 337 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 SLC6A9P48067 706 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 NUDT2P50583 147 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 FOXL1Q12952 345 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 ECH1Q13011 328 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 SLC36A3Q495N2 470 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 TMEM255AQ5JRV8 349 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 C8orf82Q6P1X6 216 aaPredicted RBP10.05□□□□□ -0.8
UPF3B-204ENST00000619445 TBPL2Q6SJ96 375 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 FAM46AQ96IP4 442 aaKnown RBP10.05□□□□□ -0.8
UPF3B-204ENST00000619445 RSRC1Q96IZ7 334 aaKnown RBP10.05□□□□□ -0.8
UPF3B-204ENST00000619445 PLEKHA8Q96JA3 519 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 ZNF582Q96NG8 517 aaPredicted RBP10.05□□□□□ -0.8
UPF3B-204ENST00000619445 OR2V2Q96R30 315 aa10.05□□□□□ -0.8
UPF3B-204ENST00000619445 COQ7Q99807 217 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms