RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 SLC41A2Q96JW4 573 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 RAB11FIP5Q9BXF6 653 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 C6orf106Q9H6K1 298 aaPredicted RBP9.75□□□□□ -0.85
UPF3A-212ENST00000619079 LMAN1LQ9HAT1 526 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 DNAJB11Q9UBS4 358 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 KCNE5Q9UJ90 142 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 IKZF2Q9UKS7 526 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 MRPS33Q9Y291 106 aaKnown RBP9.75□□□□□ -0.85
UPF3A-212ENST00000619079 TMEM14AQ9Y6G1 99 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 C13orf42A0A1B0GVH6 325 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 A0A1W2PPH5 198 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 ELOA3DA6NLF2 546 aaPredicted RBP9.75□□□□□ -0.85
UPF3A-212ENST00000619079 SLC31A2O15432 143 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 STK17BO94768 372 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 NGFRP08138 427 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 HOXB5P09067 269 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 ZNF28P17035 718 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 TBPP20226 339 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 HOXA5P20719 270 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 SERPINF1P36955 418 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 LPAR6P43657 344 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 CDX1P47902 265 aaPredicted RBP9.75□□□□□ -0.85
UPF3A-212ENST00000619079 SEC13P55735 322 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 PRPS1P60891 318 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 RAB1AP62820 205 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 MESP2Q0VG99 397 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 SGCAQ16586 387 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 ELOA3BQ3SY89 546 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 POM121L1PQ3SYA9 428 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 EEF1A1P5Q5VTE0 462 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 NSUN5P2Q63ZY6 315 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 ULK3Q6PHR2 472 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 RHOUQ7L0Q8 258 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 ADIPOR2Q86V24 386 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 ELOA3Q8NG57 546 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 OR56B1Q8NGI3 324 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 OR1J1Q8NGS3 322 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 OR2A1Q8NGT9 310 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 CASTOR1Q8WTX7 329 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 S100A13Q99584 98 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 MAP3K3Q99759 626 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 RNF126Q9BV68 326 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 FOXQ1Q9C009 403 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 FLRT3Q9NZU0 649 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 CKLFQ9UBR5 152 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 LAMP5Q9UJQ1 280 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 C19orf53Q9UNZ5 99 aaPredicted RBP9.75□□□□□ -0.85
UPF3A-212ENST00000619079 TICRRQ7Z2Z1 1910 aa9.75□□□□□ -0.85
UPF3A-212ENST00000619079 MYOFQ9NZM1 2061 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 LDB3O75112 727 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 SNRNP70P08621 437 aaKnown RBP9.74□□□□□ -0.85
UPF3A-212ENST00000619079 LIPCP11150 499 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 DRD1P21728 446 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 NME2P22392 152 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 MAS1LP35410 378 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 ACTR1BP42025 376 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 RAB28P51157 221 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 TAS2R60P59551 318 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 METRNLQ641Q3 311 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 ADAM5Q6NVV9 412 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 ADGRE4PQ86SQ3 457 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 ZNF614Q8N883 585 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 RSC1A1Q92681 617 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 SLAMF9Q96A28 289 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 RRNAD1Q96FB5 475 aaKnown RBP9.74□□□□□ -0.85
UPF3A-212ENST00000619079 C14orf144Q96I85 54 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 MRGPRX3Q96LB0 322 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 GPX7Q96SL4 187 aaPredicted RBP9.74□□□□□ -0.85
UPF3A-212ENST00000619079 NRTNQ99748 197 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 RSRP1Q9BUV0 290 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 COL25A1Q9BXS0 654 aaPredicted RBP9.74□□□□□ -0.85
UPF3A-212ENST00000619079 TAF9BQ9HBM6 251 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 PARPBPQ9NWS1 579 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 GAR1Q9NY12 217 aaKnown RBP9.74□□□□□ -0.85
UPF3A-212ENST00000619079 KCNG2Q9UJ96 466 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 A0A087WV48 116 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 hCG_1809904A0A1W2PP81 198 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 A0A1W2PR64 198 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 A0A1W2PRV1 198 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 M0R036 132 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 BRINP1O60477 761 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 LRP3O75074 770 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 PLGP00747 810 aaPredicted RBP9.74□□□□□ -0.85
UPF3A-212ENST00000619079 STATHP02808 62 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 CD63P08962 238 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 RD3LP0DJH9 198 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 ADRB3P13945 408 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 HTR2CP28335 458 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 CD1CP29017 333 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 OR2B8PP59922 312 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 PMPCAQ10713 525 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 SSX2Q16385 188 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 C2orf27AQ580R0 203 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 TMEM196Q5HYL7 178 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 LEG1Q6P5S2 330 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 LINC00114Q6XXX2 140 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 ETV3LQ6ZN32 361 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 CDC20BQ86Y33 519 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 SFTPA1Q8IWL2 248 aa9.74□□□□□ -0.85
UPF3A-212ENST00000619079 RCBTB1Q8NDN9 531 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms