RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 OR13C3Q8NGS6 347 aa15.36■□□□□ 0.05
PCDHGC3-205ENST00000617641 CMTM3Q96MX0 182 aa15.36■□□□□ 0.05
PCDHGC3-205ENST00000617641 FAM173AQ9BQD7 235 aa15.36■□□□□ 0.05
PCDHGC3-205ENST00000617641 FAM117AQ9C073 453 aa15.36■□□□□ 0.05
PCDHGC3-205ENST00000617641 RBFOX1Q9NWB1 397 aaKnown RBP15.36■□□□□ 0.05
PCDHGC3-205ENST00000617641 ABI3Q9P2A4 366 aa15.36■□□□□ 0.05
PCDHGC3-205ENST00000617641 CAMK2AQ9UQM7 478 aa15.36■□□□□ 0.05
PCDHGC3-205ENST00000617641 EP300Q09472 2414 aaPredicted RBP15.36■□□□□ 0.05
PCDHGC3-205ENST00000617641 P2RY10O00398 339 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 CXCL13O43927 109 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 LMX1BO60663 402 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 CALCBP10092 127 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 POU3F2P20265 443 aaPredicted RBP15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 ACHEP22303 614 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 NR4A2P43354 598 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 MMP16P51512 607 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 KCNMB1Q16558 191 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 SGCAQ16586 387 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 MZT2BQ6NZ67 158 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 PRSS45Q7RTY3 260 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 NKX3-1Q99801 234 aaPredicted RBP15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 TAS2R4Q9NYW5 299 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 MRPS18CQ9Y3D5 142 aaKnown RBP15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 MED13Q9UHV7 2174 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 RER1O15258 196 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 TMEM127O75204 238 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 ISG15P05161 165 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 CD2P06729 351 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 TCF15Q12870 199 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 ZNF704Q6ZNC4 412 aaPredicted RBP15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 CLEC1AQ8NC01 280 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 SYNPRQ8TBG9 265 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 ADGRG7Q96K78 797 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 IP6K3Q96PC2 410 aa15.35■□□□□ 0.05
PCDHGC3-205ENST00000617641 ZNF878C9JN71 531 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 DNPH1O43598 174 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 CD3GP09693 182 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 NR2C1P13056 603 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 GFRA1P56159 465 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 CLDN15P56746 228 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 PITPNAQ00169 270 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 PLA2G7Q13093 441 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 MTFR2Q6P444 385 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 OR10D3Q8NH80 312 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 OR2V1Q8NHB1 315 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 ROBO4Q8WZ75 1007 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 YIPF5Q969M3 257 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 ZNF416Q9BWM5 594 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 B3GNT4Q9C0J1 378 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 PBOV1Q9GZY1 135 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 FAM86C1Q9NVL1 165 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 STEAP1Q9UHE8 339 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 TTRP02766 147 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 ACSM4P0C7M7 580 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 FAM157BP0CG42 384 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 UBCP0CG48 685 aaKnown RBP15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 SRP9P49458 86 aaKnown RBP15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 MMP15P51511 669 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 TPTEP56180 551 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 C10orf128Q5T292 105 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 TMEM244Q5VVB8 128 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 AGAP6Q5VW22 663 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 BAIAP2L2Q6UXY1 529 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 SULF2Q8IWU5 870 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 PLPP7Q8NBV4 271 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 FER1L6-AS2Q96M78 137 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 AGAP4Q96P64 663 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 MRI1Q9BV20 369 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 PNRC2Q9NPJ4 139 aaKnown RBP15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 DDX28Q9NUL7 540 aaKnown RBP15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 NLKQ9UBE8 527 aa15.34■□□□□ 0.05
PCDHGC3-205ENST00000617641 FAM240BA0A1B0GVZ2 78 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 PRR33A8MZF0 331 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 LRP3O75074 770 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 ITGA5P08648 1049 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 CELA3AP09093 270 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 CSRP1P21291 193 aaKnown RBP15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 HSD11B1P28845 292 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 DCTDP32321 178 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 PRKXP51817 358 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 GPR176Q14439 515 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 TAF13Q15543 124 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 KRT74Q7RTS7 529 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 ZC3HAV1LQ96H79 300 aaKnown RBP15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 SF3B5Q9BWJ5 86 aaKnown RBP15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 ZNF703Q9H7S9 590 aaPredicted RBP15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 CKLFQ9UBR5 152 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 FOXD3Q9UJU5 478 aaPredicted RBP15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 FOXJ3Q9UPW0 622 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 ETV7Q9Y603 341 aa15.33■□□□□ 0.05
PCDHGC3-205ENST00000617641 ARPC4-TTLL3A0A0A6YYG9 625 aa15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 IGFBP3P17936 291 aaPredicted RBP15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 ZNF133P52736 654 aaPredicted RBP15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 SLC36A2Q495M3 483 aa15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 AKAP14Q86UN6 197 aa15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 DTX1Q86Y01 620 aa15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 ELMOD2Q8IZ81 293 aa15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 OR51A2Q8NGJ7 313 aa15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 GCDHQ92947 438 aaPredicted RBP15.33■□□□□ 0.04
PCDHGC3-205ENST00000617641 RBM24Q9BX46 236 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms