RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 PTAFRP25105 342 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 STOMP27105 288 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 HTR5AP47898 357 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 GDI2P50395 445 aaKnown RBP13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 NAAAQ02083 359 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 C6orf141Q5SZD1 244 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 HIST2H2BCQ6DN03 193 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 SLC30A7Q8NEW0 376 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 BPIFB6Q8NFQ5 453 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 OR10H4Q8NGA5 316 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 OR10S1Q8NGN2 331 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 ST7LQ8TDW4 575 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 SLC7A6Q92536 515 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 SLAMF6Q96DU3 332 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 TBX5Q99593 518 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 PNRC2Q9NPJ4 139 aaKnown RBP13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 EXOGQ9Y2C4 368 aaKnown RBP13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 ANKHD1Q8IWZ3 2542 aaKnown RBP13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 LOC100509620A0A075B734 347 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 IGHV2OR16-5A0A0B4J2B6 119 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 OR6C6A6NF89 314 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 A6NNC1 897 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 ZNF670-ZNF695F2Z2N8 137 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 ABCD4O14678 606 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 XPNPEP2O43895 674 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 FAM20BO75063 409 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 CD3EP07766 207 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 LYNP07948 512 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 OR2T7P0C7T2 308 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 COX5BP10606 129 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 LOXP28300 417 aaPredicted RBP13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 CALCRP30988 508 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 NR1H2P55055 460 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 SPOCK1Q08629 439 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 TAF13Q15543 124 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 KLHL22Q53GT1 634 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 KRT80Q6KB66 452 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 IL17RDQ8NFM7 739 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 OR1J2Q8NGS2 313 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 OR2T27Q8NH04 317 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 GGHQ92820 318 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 POM121L2Q96KW2 1035 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 HS3ST6Q96QI5 342 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 MNTQ99583 582 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 COQ7Q99807 217 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 KCNS3Q9BQ31 491 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 HDHD2Q9H0R4 259 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 CDH20Q9HBT6 801 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 MRPS18AQ9NVS2 196 aaKnown RBP13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 PCDHGB5Q9Y5G0 923 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 TMEM14AQ9Y6G1 99 aa13.54□□□□□ -0.24
PCDHGC3-204ENST00000617222 A0A1W2PQL4 384 aaPredicted RBP13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 C5orf49A4QMS7 147 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 F5H5K5 113 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 J3QRE1 110 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 FADS2O95864 444 aaKnown RBP13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 PLAUP00749 431 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 CRYAAP02489 173 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 DBHP09172 617 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 ZNF35P13682 527 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 SLC15A1P46059 708 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 CXCR4P61073 352 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 GALK2Q01415 458 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 RAB40BQ12829 278 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 ECH1Q13011 328 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 TBC1D28Q2M2D7 210 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 RSPO1Q2MKA7 263 aaPredicted RBP13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 PAQR4Q8N4S7 273 aaPredicted RBP13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 RFLNBQ8N5W9 214 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 OR52I1Q8NGK6 324 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 RNF133Q8WVZ7 376 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 RADILQ96JH8 1075 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 ATF6BQ99941 703 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 RHNO1Q9BSD3 238 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 COPS4Q9BT78 406 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 TTTY10Q9BZA0 68 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 PLCXD1Q9NUJ7 323 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 UBAP1Q9NZ09 502 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 MYRFQ9Y2G1 1151 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 PCDHGB1Q9Y5G3 927 aa13.53□□□□□ -0.24
PCDHGC3-204ENST00000617222 PKDREJQ9NTG1 2253 aa13.52□□□□□ -0.24
PCDHGC3-204ENST00000617222 PRR32B1ATL7 298 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF878C9JN71 531 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 ATP6V1G2-DDX39BF2Z307 99 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 PSMD9O00233 223 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 CSNK2BP67870 215 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 ADAM5Q6NVV9 412 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 SLC22A25Q6T423 547 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF322Q6U7Q0 402 aaPredicted RBP13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 KRT77Q7Z794 578 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF295-AS1Q8N0V1 137 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 ASB17Q8WXJ9 295 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 FGF20Q9NP95 211 aaPredicted RBP13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 DDX28Q9NUL7 540 aaKnown RBP13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 SLCO1C1Q9NYB5 712 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 PSORS1C1Q9UIG5 152 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 GRIP1Q9Y3R0 1128 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 RNF115Q9Y4L5 304 aa13.52□□□□□ -0.25
PCDHGC3-204ENST00000617222 LRRC42Q9Y546 428 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms