RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 NXPH3O95157 252 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 ZNF485Q8NCK3 441 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 OR4N2Q8NGD1 307 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 LHX4Q969G2 390 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 ZNF775Q96BV0 537 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 JAM3Q9BX67 310 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 ZNF586Q9NXT0 402 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 HCSTQ9UBK5 93 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 PLSCR5A0PG75 271 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 C2orf72A6NCS6 295 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 CTXN2P0C2S0 81 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 PI3P19957 117 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 CALCRP30988 508 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 ST3GAL2Q16842 350 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 TMEM52BQ4KMG9 183 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 C1QTNF12Q5T7M4 302 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 LANCL3Q6ZV70 420 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 LRRTM1Q86UE6 522 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 PLPP6Q8IY26 295 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 RXFP4Q8TDU9 374 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 MOB1AQ9H8S9 216 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 WSB2Q9NYS7 404 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 ASH2LQ9UBL3 628 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 ETHE1O95571 254 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 EIF1P41567 113 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 SSX1Q16384 188 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 STT3BQ8TCJ2 826 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 FGF13Q92913 245 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 AKR1E2Q96JD6 320 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 HDAC8Q9BY41 377 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 RNF186Q9NXI6 227 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 ARID1AO14497 2285 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 MAP1BP46821 2468 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 CHD4Q14839 1912 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 ANGPTL7O43827 346 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 ABHD16AO95870 558 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 METTL15P1P0C7V9 234 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 PCBP4P57723 403 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 BTNL8Q6UX41 500 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 LINC01465Q8N7H1 131 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 ZFP62Q8NB50 900 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 TMEM229BQ8NBD8 167 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 DUSP18Q8NEJ0 188 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 OR2G2Q8NGZ5 317 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 KCNJ15Q99712 375 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 PLA2G12AQ9BZM1 189 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 OR51I2Q9H344 312 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 TMPRSS5Q9H3S3 457 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 MICAL3Q7RTP6 2002 aa9.72□□□□□ -0.85
CLTCL1-209ENST00000617103 DSCR3O14972 297 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 MBP02144 154 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 RAB13P51153 203 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 MARCH3Q86UD3 253 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 MRPL43Q8N983 215 aaKnown RBP9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 BPIFCQ8NFQ6 507 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 OR51H1Q8NH63 302 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 FAM3CQ92520 227 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 SMIM7Q9BQ49 75 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 CREBZFQ9NS37 354 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 TM7SF3Q9NS93 570 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 SLC6A13Q9NSD5 602 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 RPH3ALQ9UNE2 315 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 TRBV5-4A0A0C4DH59 114 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 HSD17B6O14756 317 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 OLFM2O95897 454 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 SFTA3P0C7M3 94 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 HSD17B7P56937 341 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 SNRPEP62304 92 aaKnown RBP9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 PJVKQ0ZLH3 352 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 ACKR1Q16570 336 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 C9orf135Q5VTT2 229 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 OR51E1Q8TCB6 317 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 TVP23CQ96ET8 276 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 TOE1Q96GM8 510 aaKnown RBP9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 ZNF251Q9BRH9 671 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 CRLF2Q9HC73 371 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 LRIT1Q9P2V4 623 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 ZNF346Q9UL40 294 aaKnown RBP9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 LHX6Q9UPM6 363 aa9.71□□□□□ -0.85
CLTCL1-209ENST00000617103 LRP3O75074 770 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 RPA2P15927 270 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 TNFSF4P23510 183 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 BSGP35613 385 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 ZNF90Q03938 601 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 TFAP2EQ6VUC0 442 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 ADIPOR2Q86V24 386 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 SPICQ8N5J4 248 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 OR13D1Q8NGV5 346 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 SLAMF6Q96DU3 332 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 SEMA6CQ9H3T2 930 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 LAMA4Q16363 1823 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 GSTP1P09211 210 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 ATF1P18846 271 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 GJA4P35212 333 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 SLC10A1Q14973 349 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 LTC4SQ16873 150 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 TMEM128Q5BJH2 165 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 OR2W3Q7Z3T1 314 aa9.71□□□□□ -0.86
CLTCL1-209ENST00000617103 HSD17B13Q7Z5P4 300 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms