RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SH3GL3Q99963 347 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 RNF121Q9H920 327 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 CCNB1IP1Q9NPC3 277 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 POLE4Q9NR33 117 aa12.91□□□□□ -0.34
UBXN1-218ENST00000616865 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.91□□□□□ -0.34
UBXN1-218ENST00000616865 C12orf71A8MTZ7 269 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 A8MV72 311 aaPredicted RBP12.9□□□□□ -0.34
UBXN1-218ENST00000616865 ENTPD6O75354 484 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 GPANK1O95872 356 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 WNT11O96014 354 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 CD8AP01732 235 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 HOXB1P14653 301 aaPredicted RBP12.9□□□□□ -0.34
UBXN1-218ENST00000616865 PCBD1P61457 104 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 TBRG1Q3YBR2 411 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 SLC36A2Q495M3 483 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 NRN1LQ496H8 165 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 AADACL4Q5VUY2 407 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 TMEM53Q6P2H8 277 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 DPPA2Q7Z7J5 298 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 P2RY8Q86VZ1 359 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 ERI1Q8IV48 349 aaKnown RBP12.9□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF511Q8NB15 262 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 OR2AJ1Q8NGZ0 328 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 C11orf40Q8WZ69 217 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 INTS14Q96SY0 518 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 TEAD3Q99594 435 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 EMC7Q9NPA0 242 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 SLC17A5Q9NRA2 495 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 FAIMQ9NVQ4 179 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 CISD1Q9NZ45 108 aaKnown RBP12.9□□□□□ -0.34
UBXN1-218ENST00000616865 AASSQ9UDR5 926 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 WARS2Q9UGM6 360 aaKnown RBP12.9□□□□□ -0.34
UBXN1-218ENST00000616865 AMDHD2Q9Y303 409 aa12.9□□□□□ -0.34
UBXN1-218ENST00000616865 OR5H1A6NKK0 313 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 SHISA9B4DS77 424 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 UBL3O95164 117 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 MPZL1O95297 269 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 CST2P09228 141 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 SPARCP09486 303 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 SLC2A5P22732 501 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 MYF6P23409 242 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 HTR1FP30939 366 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 LSM6P62312 80 aaKnown RBP12.89□□□□□ -0.35
UBXN1-218ENST00000616865 PPA1Q15181 289 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 MEP1BQ16820 701 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 TIMM23BQ5SRD1 257 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 SLC25A30Q5SVS4 291 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 FAM27BQ5VT28 67 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 FOXL2NBQ6ZUU3 175 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 USP51Q70EK9 711 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 ZNF627Q7L945 461 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 SLC26A10Q8NG04 563 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 OR6N2Q8NGY6 317 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 OR52N5Q8NH56 324 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 CNIH3Q8TBE1 160 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 ZNRF4Q8WWF5 429 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 ANKRD60Q9BZ19 345 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 OBP2BQ9NPH6 170 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 KCNG2Q9UJ96 466 aa12.89□□□□□ -0.35
UBXN1-218ENST00000616865 IGHV4-30-2A0A087WSY4 118 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 A0A096LNT2 108 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 A0A1W2PR80 420 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 CCDC182A6NF36 153 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 ABCD4O14678 606 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 SSX4O60224 188 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 GPRIN2O60269 458 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 RAB36O95755 333 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 MRPL3P09001 348 aaKnown RBP12.88□□□□□ -0.35
UBXN1-218ENST00000616865 GAAP10253 952 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 ARR3P36575 388 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 NAA10P41227 235 aaPredicted RBP12.88□□□□□ -0.35
UBXN1-218ENST00000616865 MTNR1AP48039 350 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 ENTPD1P49961 510 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 NUDT6P53370 316 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 ISL1P61371 349 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 TUBA1BP68363 451 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 TUBA4AP68366 448 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 PIGFQ07326 219 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 POU4F2Q12837 409 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 TMED1Q13445 227 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 KCNMB1Q16558 191 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 UGT2A3Q6UWM9 527 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 B3GLCTQ6Y288 498 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 TUBA1AQ71U36 451 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 SSX8Q7RTT4 187 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 SKA3Q8IX90 412 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 NABP1Q96AH0 204 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 CNN2Q99439 309 aaKnown RBP12.88□□□□□ -0.35
UBXN1-218ENST00000616865 ZNF416Q9BWM5 594 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 NPAP1Q9NZP6 1156 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 RPL36Q9Y3U8 105 aaKnown RBP12.88□□□□□ -0.35
UBXN1-218ENST00000616865 COMMD3-BMI1R4GMX3 469 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 ALPK2Q86TB3 2170 aa12.88□□□□□ -0.35
UBXN1-218ENST00000616865 ARPC4-TTLL3A0A0A6YYG9 625 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 ZNF593O00488 134 aaPredicted RBP12.87□□□□□ -0.35
UBXN1-218ENST00000616865 PHF1O43189 567 aaPredicted RBP12.87□□□□□ -0.35
UBXN1-218ENST00000616865 FAM20BO75063 409 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 HLA-HP01893 362 aa12.87□□□□□ -0.35
UBXN1-218ENST00000616865 TFP02787 698 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms