RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 SIRT3Q9NTG7 399 aaPredicted RBP11.58□□□□□ -0.56
TCF4-248ENST00000616053 A0A1W2PQL4 384 aaPredicted RBP11.58□□□□□ -0.56
TCF4-248ENST00000616053 M0R135 149 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 WNT4P56705 351 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 ROM1Q03395 351 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 CST9Q5W186 159 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 ANKRD53Q8N9V6 530 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 ZNF799Q96GE5 643 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 C19orf57Q0VDD7 668 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 SPATA46Q5T0L3 261 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 SLCO4A1Q96BD0 722 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 GALMQ96C23 342 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 OR5M11Q96RB7 305 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 SLC22A12Q96S37 553 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 INPP5KQ9BT40 448 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 ACTR3CQ9C0K3 210 aaPredicted RBP11.58□□□□□ -0.56
TCF4-248ENST00000616053 IGKV3OR2-268A0A0C4DH90 116 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 SERINC4A6NH21 518 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 OR6C76A6NM76 312 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 H3BVH4 76 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 CD82P27701 267 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 NSUN5Q96P11 429 aaKnown RBP11.57□□□□□ -0.56
TCF4-248ENST00000616053 HSD3B7Q9H2F3 369 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 RIMS1Q86UR5 1692 aaKnown RBP11.57□□□□□ -0.56
TCF4-248ENST00000616053 NEURL1O76050 574 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 LAMP1P11279 417 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 UCNP55089 124 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 LGI3Q8N145 548 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 C12orf42Q96LP6 360 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 FEVQ99581 238 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 TXNRD2Q9NNW7 524 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 SSU72Q9NP77 194 aaKnown RBP11.57□□□□□ -0.56
TCF4-248ENST00000616053 SLC7A10Q9NS82 523 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 SLCO1C1Q9NYB5 712 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 SLAMF8Q9P0V8 285 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 PLIN4Q96Q06 1357 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 PRAF2O60831 178 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 EBLN2Q6P2I7 272 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 TRAPPC4Q9Y296 219 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 CCDC88AQ3V6T2 1871 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 IGKV3D-15A0A087WSY6 115 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 IGKV3-15P01624 115 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 ERVFC1-1P60608 527 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 ZNF750Q32MQ0 723 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 PARS2Q7L3T8 475 aaKnown RBP11.57□□□□□ -0.56
TCF4-248ENST00000616053 SNAI1O95863 264 aaPredicted RBP11.57□□□□□ -0.56
TCF4-248ENST00000616053 TFPI2P48307 235 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 ERMP1Q7Z2K6 904 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 GNRHR2Q96P88 292 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 STRAPQ9Y3F4 350 aaKnown RBP11.57□□□□□ -0.56
TCF4-248ENST00000616053 CLDN8P56748 225 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 DYNC2LI1Q8TCX1 351 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 DDX31Q9H8H2 851 aaKnown RBP11.57□□□□□ -0.56
TCF4-248ENST00000616053 IGKV3D-11A0A0A0MRZ8 115 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 IGKV3-11P04433 115 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 SLC26A1Q9H2B4 701 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 OR52D1Q9H346 318 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 AMDHD2Q9Y303 409 aa11.57□□□□□ -0.56
TCF4-248ENST00000616053 ZNF487B1APH4 448 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 NQO2P16083 231 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 KCNAB1Q14722 419 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 NECAP1Q8NC96 275 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 APOBEC4Q8WW27 367 aaKnown RBP11.56□□□□□ -0.56
TCF4-248ENST00000616053 FAM210AQ96ND0 272 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 OR5AL1P0C617 328 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 HMGN3Q15651 99 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 ZDHHC23Q8IYP9 409 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 ENTHD1Q8IYW4 607 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 IMP4Q96G21 291 aaKnown RBP11.56□□□□□ -0.56
TCF4-248ENST00000616053 VSIG4Q9Y279 399 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 MIA3Q5JRA6 1907 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 PNLIPRP2P54317 469 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 TNFAIP6P98066 277 aaPredicted RBP11.56□□□□□ -0.56
TCF4-248ENST00000616053 CNPY1Q3B7I2 92 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 CMBLQ96DG6 245 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 ZNF586Q9NXT0 402 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 A0A1W2PN81 502 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 A6NIN4 97 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 G3V3Q6 166 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 TO15178 435 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 KCNAB3O43448 404 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 SLC25A5P05141 298 aaKnown RBP11.56□□□□□ -0.56
TCF4-248ENST00000616053 ZNF26P17031 533 aaPredicted RBP11.56□□□□□ -0.56
TCF4-248ENST00000616053 EGR1P18146 543 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 CHRNA7P36544 502 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 DEFA6Q01524 100 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 YOD1Q5VVQ6 348 aaPredicted RBP11.56□□□□□ -0.56
TCF4-248ENST00000616053 FCRLAQ7L513 359 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 CXorf67Q86X51 503 aaPredicted RBP11.56□□□□□ -0.56
TCF4-248ENST00000616053 DOCK7Q96N67 2140 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 ATRNO75882 1429 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 A0A1W2PNR3 127 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 HRO43593 1189 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 CDK2AP2O75956 126 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 RPLP1P05386 114 aaKnown RBP11.56□□□□□ -0.56
TCF4-248ENST00000616053 PSMB5P28074 263 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 H1FNTQ75WM6 255 aaPredicted RBP11.56□□□□□ -0.56
TCF4-248ENST00000616053 C8orf44Q96CB5 159 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 TXNIPQ9H3M7 391 aa11.56□□□□□ -0.56
TCF4-248ENST00000616053 TMEM82A0PJX8 343 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms