RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 RPUSD3Q6P087 351 aaKnown RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 MRPL14Q6P1L8 145 aaKnown RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 DEF8Q6ZN54 512 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 KCTD9Q7L273 389 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 FAM89BQ8N5H3 189 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 SLC38A5Q8WUX1 472 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 DGAT2Q96PD7 388 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 OR7D2Q96RA2 312 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 DIRC2Q96SL1 478 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 COL25A1Q9BXS0 654 aaPredicted RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 SEC11CQ9BY50 192 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 NMNAT1Q9HAN9 279 aaPredicted RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 BARX1Q9HBU1 254 aaPredicted RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 EXOSC3Q9NQT5 275 aaKnown RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 RASL12Q9NYN1 266 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 FBXL4Q9UKA2 621 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 YARS2Q9Y2Z4 477 aaKnown RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 FAM171A2A8MVW0 826 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 OGG1O15527 345 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 SUSD5O60279 629 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 CST1P01037 141 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 HMGN2P05204 90 aaKnown RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 MELTFP08582 738 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 CSRP1P21291 193 aaKnown RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 AKR1C2P52895 323 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 AKR1C1Q04828 323 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 HAGHQ16775 308 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 MESTQ5EB52 335 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 ANKRD34AQ69YU3 496 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 TMEM200AQ86VY9 491 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 ZNF615Q8N8J6 731 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 OR2I1PQ8NGU4 316 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 GEMIN6Q8WXD5 167 aaKnown RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 OR6C1Q96RD1 312 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 SPRY4Q9C004 299 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 ZNF350Q9GZX5 532 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 POFUT1Q9H488 388 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 FBXO34Q9NWN3 711 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 C5AR2Q9P296 337 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 LOC102723996A0A087X1L8 192 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 ZNF705EA8MWA4 302 aaPredicted RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 TGFBR3LH3BV60 316 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 HYAL3O43820 417 aaPredicted RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 FZD7O75084 574 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 IGKV3-11P04433 115 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 RAB5AP20339 215 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 SHC1P29353 583 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 XCR1P46094 333 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 KLF3P57682 345 aaPredicted RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 CXADRP78310 365 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 FUT5Q11128 374 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 IL18Q14116 193 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.94□□□□□ -1.14
VPS11-206ENST00000614944 HIST2H3PS2Q5TEC6 136 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 TMEM205Q6UW68 189 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 TTLL10Q6ZVT0 673 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 OR2D3Q8NGH3 330 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 CLCC1Q96S66 551 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 EPYCQ99645 322 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 TMPRSS13Q9BYE2 586 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 HIPK2Q9H2X6 1198 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 RCC2Q9P258 522 aaKnown RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 SLC5A6Q9Y289 635 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 ZNF281Q9Y2X9 895 aa7.94□□□□□ -1.14
VPS11-206ENST00000614944 YLPM1P49750 1951 aaKnown RBP7.94□□□□□ -1.14
VPS11-206ENST00000614944 GLOD5A6NK44 160 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 SCRG1O75711 98 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 NCR1O76036 304 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 TFP02787 698 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 MYF5P13349 255 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 SDC2P34741 201 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 GLP1RP43220 463 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 HMGA2P52926 109 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 KIAA0141Q14154 515 aaPredicted RBP7.93□□□□□ -1.14
VPS11-206ENST00000614944 RBM39Q14498 530 aaKnown RBP7.93□□□□□ -1.14
VPS11-206ENST00000614944 METAP1DQ6UB28 335 aaPredicted RBP7.93□□□□□ -1.14
VPS11-206ENST00000614944 C5orf24Q7Z6I8 188 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 MYPOPQ86VE0 399 aaPredicted RBP7.93□□□□□ -1.14
VPS11-206ENST00000614944 ZNF573Q86YE8 665 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 ZNF664Q8N3J9 261 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 JAGN1Q8N5M9 183 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 OR2V1Q8NHB1 315 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 NFKBIDQ8NI38 313 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 TMEM19Q96HH6 336 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 VSTM2LQ96N03 204 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 SLC46A1Q96NT5 459 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 PRRT1Q99946 306 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 PCGF1Q9BSM1 259 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 THAP7Q9BT49 309 aaPredicted RBP7.93□□□□□ -1.14
VPS11-206ENST00000614944 CHIAQ9BZP6 476 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 HHATLQ9HCP6 504 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 FBXL3Q9UKT7 428 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 CHST2Q9Y4C5 530 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 RALGAPA1Q6GYQ0 2036 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 GKN3PP0CG01 181 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 ACP2P11117 423 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 PEPDP12955 493 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 TBPP20226 339 aa7.93□□□□□ -1.14
VPS11-206ENST00000614944 DRD5P21918 477 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms