RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 RIPPLY2Q5TAB7 128 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 OR7E24Q6IFN5 339 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 CORO6Q6QEF8 472 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 C20orf204Q6ZNR8 217 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 SPATC1Q76KD6 591 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 OR13C5Q8NGS8 318 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 BORCS5Q969J3 196 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 SLAMF6Q96DU3 332 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 WDYHV1Q96HA8 205 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 C4orf45Q96LM5 186 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 RBM24Q9BX46 236 aaKnown RBP7.87□□□□□ -1.15
CCDC47-207ENST00000612558 PPIL3Q9H2H8 161 aaKnown RBP7.87□□□□□ -1.15
CCDC47-207ENST00000612558 RNF122Q9H9V4 155 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 BRD7Q9NPI1 651 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 CENPMQ9NSP4 180 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 PARPBPQ9NWS1 579 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 EMC3Q9P0I2 261 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 SPRR3Q9UBC9 169 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 PLEKHB1Q9UF11 243 aaPredicted RBP7.87□□□□□ -1.15
CCDC47-207ENST00000612558 LHFPL6Q9Y693 200 aa7.87□□□□□ -1.15
CCDC47-207ENST00000612558 A0A1B0GTH9 108 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 A0A1B0GVC2 190 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 OR6C65A6NJZ3 312 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF724A8MTY0 619 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 MRPL33O75394 65 aaKnown RBP7.86□□□□□ -1.15
CCDC47-207ENST00000612558 PNPP00491 289 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 NPR2P20594 1047 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 CFL1P23528 166 aaKnown RBP7.86□□□□□ -1.15
CCDC47-207ENST00000612558 MAPK3P27361 379 aaPredicted RBP7.86□□□□□ -1.15
CCDC47-207ENST00000612558 DCTDP32321 178 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 MRPS34P82930 218 aaKnown RBP7.86□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF169Q14929 603 aaPredicted RBP7.86□□□□□ -1.15
CCDC47-207ENST00000612558 INAQ16352 499 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 Q499Y3 187 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 WDR38Q5JTN6 314 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 FAM27D1Q5T7N8 215 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 CATSPERDQ86XM0 798 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 CROCCP3Q8IVE0 287 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 SPACA3Q8IXA5 215 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 GPR137CQ8N3F9 429 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 PRSS35Q8N3Z0 413 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF676Q8N7Q3 588 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 FNDC9Q8TBE3 224 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 CPT1CQ8TCG5 803 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 THRSPQ92748 146 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 OR14A2Q96R54 314 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 NIPAL2Q9H841 368 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 BCO1Q9HAY6 547 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 SMURF1Q9HCE7 757 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 ASH2LQ9UBL3 628 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 DKK4Q9UBT3 224 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 NOSIPQ9Y314 301 aaKnown RBP7.86□□□□□ -1.15
CCDC47-207ENST00000612558 R4GMQ9 66 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 LOC400499M0QZD8 3231 aa7.86□□□□□ -1.15
CCDC47-207ENST00000612558 TNRC6AQ8NDV7 1962 aaKnown RBP7.85□□□□□ -1.15
CCDC47-207ENST00000612558 DCHS1Q96JQ0 3298 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 TRBV5-5A0A0J9YX44 114 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 TMEM269A0A1B0GVZ9 245 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF878C9JN71 531 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 TAF4O00268 1085 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 AQP7O14520 342 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 CTDSP2O14595 271 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 SRSF10O75494 262 aaKnown RBP7.85□□□□□ -1.15
CCDC47-207ENST00000612558 WNT11O96014 354 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 OCM2P0CE71 109 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 EIF2S3P41091 472 aaKnown RBP7.85□□□□□ -1.15
CCDC47-207ENST00000612558 KIR3DL2P43630 455 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 CAV3P56539 151 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF45Q02386 682 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 HSD17B12Q53GQ0 312 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 FAM27BQ5VT28 67 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 KLHL24Q6TFL4 600 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 CFAP77Q6ZQR2 320 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 Q6ZS92 163 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 MCEMP1Q8IX19 187 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 TUSC5Q8IXB3 177 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 MFSD4AQ8N468 514 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 GJC3Q8NFK1 279 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 IL17RDQ8NFM7 739 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 OR10S1Q8NGN2 331 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 GPR148Q8TDV2 347 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 RGP1Q92546 391 aaPredicted RBP7.85□□□□□ -1.15
CCDC47-207ENST00000612558 NABP1Q96AH0 204 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 CEP19Q96LK0 163 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 KRTAP4-12Q9BQ66 201 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 ZNF416Q9BWM5 594 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 CRLF2Q9HC73 371 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 PALMDQ9NP74 551 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 NOX4Q9NPH5 578 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 FBXL3Q9UKT7 428 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 GTF2A1LQ9UNN4 478 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 CAMK2AQ9UQM7 478 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 CEP295Q9C0D2 2601 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 SPTBN4Q9H254 2564 aa7.85□□□□□ -1.15
CCDC47-207ENST00000612558 A0A087WV48 116 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 A0A1W2PPK0 400 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 SMIM30A4D0T7 59 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 LOC110117498-PIK3R3F6TDL0 507 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 MKRN2OSH3BPM6 223 aa7.84□□□□□ -1.15
CCDC47-207ENST00000612558 RER1O15258 196 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms