RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 ITGB4P16144 1822 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 LTBP4Q8N2S1 1624 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 GLYATL1P3A0A0U1RQE8 302 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 A0A1B0GW55 424 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 A0A1W2PPE3 182 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 CYB5R3P00387 301 aaPredicted RBP1.78□□□□□ -2.12
HDDC2-207ENST00000608532 EIF4EP06730 217 aaKnown RBP1.78□□□□□ -2.12
HDDC2-207ENST00000608532 CRYGBP07316 175 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 PABPC4LP0CB38 370 aaKnown RBP1.78□□□□□ -2.12
HDDC2-207ENST00000608532 DUX4L2P0CJ85 424 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 DUX4L3P0CJ86 424 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 DUX4L5P0CJ88 424 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 DUX4L6P0CJ89 424 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 DUX4L7P0CJ90 424 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 CD37P11049 281 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 LOXP28300 417 aaPredicted RBP1.78□□□□□ -2.12
HDDC2-207ENST00000608532 AIF1P55008 147 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 C6orf226Q5I0X4 101 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 ZSCAN30Q86W11 494 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 TBC1D31Q96DN5 1066 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 SLC41A3Q96GZ6 507 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 DNAJC1Q96KC8 554 aaKnown RBP1.78□□□□□ -2.12
HDDC2-207ENST00000608532 IP6K3Q96PC2 410 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 OR5B12Q96R08 314 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 ROPN1BQ9BZX4 212 aaPredicted RBP1.78□□□□□ -2.12
HDDC2-207ENST00000608532 GORASP2Q9H8Y8 452 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 ETNK2Q9NVF9 386 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 DUX4Q9UBX2 424 aa1.78□□□□□ -2.12
HDDC2-207ENST00000608532 IGLV1-36A0A0B4J1U3 117 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 CLRN2A0PK11 232 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 NUPL2O15504 423 aaKnown RBP1.77□□□□□ -2.13
HDDC2-207ENST00000608532 IL1BP01584 269 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 CSNK1EP49674 416 aaKnown RBP1.77□□□□□ -2.13
HDDC2-207ENST00000608532 TPMTP51580 245 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 CCNA1P78396 465 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 TMEM136Q6ZRR5 245 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 COX18Q8N8Q8 333 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 OR10AD1Q8NGE0 317 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 OR5B3Q8NH48 314 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 ZNF317Q96PQ6 595 aaPredicted RBP1.77□□□□□ -2.13
HDDC2-207ENST00000608532 GGTLC1Q9BX51 225 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 GON7Q9BXV9 100 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 NUP50Q9UKX7 468 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 KCNE3Q9Y6H6 103 aa1.77□□□□□ -2.13
HDDC2-207ENST00000608532 ZNF407Q9C0G0 2248 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 PCNX2A6NKB5 2137 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 FBN1P35555 2871 aaKnown RBP1.76□□□□□ -2.13
HDDC2-207ENST00000608532 IGHV7-4-1A0A0J9YVY3 117 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 OR52A4PA6NMU1 304 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 MANBAO00462 879 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 GGT1P19440 569 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 CCNHP51946 323 aaPredicted RBP1.76□□□□□ -2.13
HDDC2-207ENST00000608532 PPP1CBP62140 327 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 TGM3Q08188 693 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 QPRTQ15274 297 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 FAM222AQ5U5X8 452 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 GUSBP11Q6P575 273 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 FBXL13Q8NEE6 735 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 KLF14Q8TD94 323 aaPredicted RBP1.76□□□□□ -2.13
HDDC2-207ENST00000608532 MICU1Q9BPX6 476 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 TM2D3Q9BRN9 247 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 VANGL2Q9ULK5 521 aa1.76□□□□□ -2.13
HDDC2-207ENST00000608532 MYO16Q9Y6X6 1858 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 GABRR3A8MPY1 467 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 NDUFC2-KCTD14E9PQ53 114 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 J3QRE1 110 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 NVLO15381 856 aaKnown RBP1.75□□□□□ -2.13
HDDC2-207ENST00000608532 EIF1BO60739 113 aaKnown RBP1.75□□□□□ -2.13
HDDC2-207ENST00000608532 SURF6O75683 361 aaKnown RBP1.75□□□□□ -2.13
HDDC2-207ENST00000608532 CNMDO75829 334 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 CLPXO76031 633 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 CTSLP07711 333 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 ERGP11308 486 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 GLRA2P23416 452 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 GPX4P36969 197 aaPredicted RBP1.75□□□□□ -2.13
HDDC2-207ENST00000608532 EIF1P41567 113 aaKnown RBP1.75□□□□□ -2.13
HDDC2-207ENST00000608532 PRLHRP49683 370 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 UBE2HP62256 183 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 ZNF235Q14590 738 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 ADNP2Q6IQ32 1131 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 KDELC1Q6UW63 502 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 ADM2Q7Z4H4 148 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 NKAIN4Q8IVV8 208 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 ZNF101Q8IZC7 436 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 BHLHE23Q8NDY6 225 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 OR52M1Q8NGK5 317 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 CCDC126Q96EE4 140 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 ZSCAN16Q9H4T2 348 aaPredicted RBP1.75□□□□□ -2.13
HDDC2-207ENST00000608532 FGF20Q9NP95 211 aaPredicted RBP1.75□□□□□ -2.13
HDDC2-207ENST00000608532 TMEM9BQ9NQ34 198 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 CRCT1Q9UGL9 99 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 OTOGLQ3ZCN5 2332 aa1.75□□□□□ -2.13
HDDC2-207ENST00000608532 IGHV3-49A0A0A0MS15 119 aa1.74□□□□□ -2.13
HDDC2-207ENST00000608532 CEACAM18A8MTB9 384 aa1.74□□□□□ -2.13
HDDC2-207ENST00000608532 CDC40O60508 579 aaKnown RBP eCLIP1.74□□□□□ -2.13
HDDC2-207ENST00000608532 SEMA3DO95025 777 aa1.74□□□□□ -2.13
HDDC2-207ENST00000608532 PSMB5P28074 263 aa1.74□□□□□ -2.13
HDDC2-207ENST00000608532 SYKP43405 635 aa1.74□□□□□ -2.13
HDDC2-207ENST00000608532 RPL23P62829 140 aaKnown RBP1.74□□□□□ -2.13
HDDC2-207ENST00000608532 DMC1Q14565 340 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms