RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 ZNF181Q2M3W8 571 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 ALG10Q5BKT4 473 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 KLF17Q5JT82 389 aaPredicted RBP5.29□□□□□ -1.56
CUX1-220ENST00000607092 SPATA46Q5T0L3 261 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 ARMC4Q5T2S8 1044 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 EPGNQ6UW88 154 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 ZNF620Q6ZNG0 422 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 ANKRD42Q8N9B4 389 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 OR2Z1Q8NG97 314 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 OR6T1Q8NGN1 323 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 OR9I1Q8NGQ6 314 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 OR13G1Q8NGZ3 307 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 TSPEARQ8WU66 669 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 DYDC1Q8WWB3 177 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 WFDC12Q8WWY7 111 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 GEMIN6Q8WXD5 167 aaKnown RBP5.29□□□□□ -1.56
CUX1-220ENST00000607092 DYRK2Q92630 601 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 PTP4A1Q93096 173 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 ZBTB9Q96C00 473 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 RASD2Q96D21 266 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 SGTBQ96EQ0 304 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 ZNF583Q96ND8 569 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 CITED1Q99966 193 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 CCDC28BQ9BUN5 200 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 RSRP1Q9BUV0 290 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 TRIM15Q9C019 465 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 MSL2Q9HCI7 577 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 MMP26Q9NRE1 261 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 SLC25A37Q9NYZ2 338 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 CLN8Q9UBY8 286 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 CAB39Q9Y376 341 aaPredicted RBP5.29□□□□□ -1.56
CUX1-220ENST00000607092 MED31Q9Y3C7 131 aa5.29□□□□□ -1.56
CUX1-220ENST00000607092 LOC100509620A0A075B734 347 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 TRBV5-3A0A0A0MS03 114 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 TRAV40A0A0B4J280 105 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 BTBD17A6NE02 478 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 FAM181BA6NEQ2 426 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 CEACAM18A8MTB9 384 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 TMEM178BH3BS89 294 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 M0R3H8 397 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 P2RY10O00398 339 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 XKRYO14609 159 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 ANGPT2O15123 496 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 HOXA3O43365 443 aaPredicted RBP5.28□□□□□ -1.56
CUX1-220ENST00000607092 NDUFA2O43678 99 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 TPST2O60704 377 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 OR7A10O76100 309 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 OR5F1O95221 314 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 F13BP05160 661 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 MDKP21741 143 aaPredicted RBP5.28□□□□□ -1.56
CUX1-220ENST00000607092 CD80P33681 288 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 PITPNBP48739 271 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 SMCPP49901 116 aaPredicted RBP5.28□□□□□ -1.56
CUX1-220ENST00000607092 TAS2R41P59536 307 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 RPL27P61353 136 aaKnown RBP5.28□□□□□ -1.56
CUX1-220ENST00000607092 ERVK-25P63136 954 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 PSG7Q13046 419 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 MPP2Q14168 576 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 ZMYND11Q15326 602 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 TAF9Q16594 264 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 DUSP7Q16829 419 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 C2orf68Q2NKX9 166 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 PGM2L1Q6PCE3 622 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 GDPGP1Q6ZNW5 385 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 RFPL4BQ6ZWI9 263 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 REC114Q7Z4M0 266 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 DHDDSQ86SQ9 333 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 KLBQ86Z14 1044 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 CELF2-AS1Q8N7Q2 184 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 PNLDC1Q8NA58 520 aaKnown RBP5.28□□□□□ -1.56
CUX1-220ENST00000607092 SMYD1Q8NB12 490 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 PCYOX1LQ8NBM8 494 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 OR11L1Q8NGX0 322 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 TMEM239Q8WW34 195 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 GATAD2BQ8WXI9 593 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 NABP1Q96AH0 204 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 HAVCR1Q96D42 359 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 C1orf147Q96MC9 270 aaPredicted RBP5.28□□□□□ -1.56
CUX1-220ENST00000607092 ZNF48Q96MX3 618 aaPredicted RBP5.28□□□□□ -1.56
CUX1-220ENST00000607092 C7orf26Q96N11 449 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 ZNF582Q96NG8 517 aaPredicted RBP5.28□□□□□ -1.56
CUX1-220ENST00000607092 DUX5Q96PT3 197 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 OR2V2Q96R30 315 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 OR52B2Q96RD2 323 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 NUDT16L1Q9BRJ7 211 aaKnown RBP5.28□□□□□ -1.56
CUX1-220ENST00000607092 SLC22A4Q9H015 551 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 WNT5BQ9H1J7 359 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 DPAGT1Q9H3H5 408 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 CCDC167Q9P0B6 97 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 VAPAQ9P0L0 249 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 HIF3AQ9Y2N7 669 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 NDUFAF1Q9Y375 327 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 UGT2A1Q9Y4X1 527 aa5.28□□□□□ -1.56
CUX1-220ENST00000607092 C5orf63A6NC05 138 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 OR6C6A6NF89 314 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 ERICH4A6NGS2 130 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 SLC22A31A6NKX4 558 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 SGCEO43556 437 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 SNX3O60493 162 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 SLC2A10O95528 541 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms