RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PIN1P1O15428 100 aa19.01■□□□□ 0.63
USP6NL-204ENST00000606752 KRT33AO76009 404 aa19.01■□□□□ 0.63
USP6NL-204ENST00000606752 WISP2O76076 250 aa19.01■□□□□ 0.63
USP6NL-204ENST00000606752 TSPO2Q5TGU0 170 aa19.01■□□□□ 0.63
USP6NL-204ENST00000606752 LRRC18Q8N456 261 aa19.01■□□□□ 0.63
USP6NL-204ENST00000606752 G6PC2Q9NQR9 355 aa19.01■□□□□ 0.63
USP6NL-204ENST00000606752 OR52A1Q9UKL2 312 aa19.01■□□□□ 0.63
USP6NL-204ENST00000606752 CLEC4AQ9UMR7 237 aa19.01■□□□□ 0.63
USP6NL-204ENST00000606752 ACOD1A6NK06 481 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 TGM6O95932 706 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 SRMP19623 302 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 CFL1P23528 166 aaKnown RBP19■□□□□ 0.63
USP6NL-204ENST00000606752 MAGEB1P43366 347 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 TAF13Q15543 124 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 ODF4Q2M2E3 257 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 CEACAM16Q2WEN9 425 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 RPUSD3Q6P087 351 aaKnown RBP19■□□□□ 0.63
USP6NL-204ENST00000606752 ZC3HAV1Q7Z2W4 902 aaKnown RBP19■□□□□ 0.63
USP6NL-204ENST00000606752 NR2C2APQ86WQ0 139 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 CROCCP3Q8IVE0 287 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 SARAFQ96BY9 339 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 GP6Q9HCN6 339 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 FAM206AQ9NX38 181 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 B3GNT3Q9Y2A9 372 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 FRYQ5TBA9 3013 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 RGS5O15539 181 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 RAF1P04049 648 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 FCGR2AP12318 317 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 RAB3BP20337 219 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 HIST1H3AP68431 136 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 HIST2H3PS2Q5TEC6 136 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 HIST2H3AQ71DI3 136 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 ADGRE4PQ86SQ3 457 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 OR10AC1Q8NH08 325 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 THRSPQ92748 146 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 FOXB1Q99853 325 aa19■□□□□ 0.63
USP6NL-204ENST00000606752 J3QRK9 145 aa18.99■□□□□ 0.63
USP6NL-204ENST00000606752 TAF4O00268 1085 aa18.99■□□□□ 0.63
USP6NL-204ENST00000606752 HSD11B1P28845 292 aa18.99■□□□□ 0.63
USP6NL-204ENST00000606752 ZNF704Q6ZNC4 412 aaPredicted RBP18.99■□□□□ 0.63
USP6NL-204ENST00000606752 APH1AQ96BI3 265 aa18.99■□□□□ 0.63
USP6NL-204ENST00000606752 CEP19Q96LK0 163 aa18.99■□□□□ 0.63
USP6NL-204ENST00000606752 SLC7A10Q9NS82 523 aa18.99■□□□□ 0.63
USP6NL-204ENST00000606752 CEP295Q9C0D2 2601 aa18.98■□□□□ 0.63
USP6NL-204ENST00000606752 ISG15P05161 165 aa18.98■□□□□ 0.63
USP6NL-204ENST00000606752 CST2P09228 141 aa18.98■□□□□ 0.63
USP6NL-204ENST00000606752 SOX2P48431 317 aa18.98■□□□□ 0.63
USP6NL-204ENST00000606752 GRB2P62993 217 aaKnown RBP18.98■□□□□ 0.63
USP6NL-204ENST00000606752 STK11Q15831 433 aa18.98■□□□□ 0.63
USP6NL-204ENST00000606752 TBR1Q16650 682 aa18.98■□□□□ 0.63
USP6NL-204ENST00000606752 OR51A4Q8NGJ6 313 aa18.98■□□□□ 0.63
USP6NL-204ENST00000606752 FBXO17Q96EF6 278 aa18.98■□□□□ 0.63
USP6NL-204ENST00000606752 ABHD17AQ96GS6 310 aa18.98■□□□□ 0.63
USP6NL-204ENST00000606752 ATF6BQ99941 703 aa18.98■□□□□ 0.63
USP6NL-204ENST00000606752 DDX28Q9NUL7 540 aaKnown RBP18.98■□□□□ 0.63
USP6NL-204ENST00000606752 CMAHPQ9Y471 501 aa18.98■□□□□ 0.63
USP6NL-204ENST00000606752 TRBV5-7A0A0A0MS05 114 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 RPL36A-HNRNPH2H7BZ11 118 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 IGHV3-9P01782 118 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 CTSSP25774 331 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 TNFSF8P32971 234 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 ETV6P41212 452 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 OR10A3P58181 314 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 ZNF45Q02386 682 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 PLEKHN1Q494U1 663 aaPredicted RBP18.97■□□□□ 0.63
USP6NL-204ENST00000606752 BCL2L15Q5TBC7 163 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 CCDC190Q86UF4 302 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 A0A0G2JK05 382 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 PSMA6P60900 246 aaKnown RBP18.97■□□□□ 0.63
USP6NL-204ENST00000606752 NRN1LQ496H8 165 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 CCDC92Q53HC0 331 aaPredicted RBP18.97■□□□□ 0.63
USP6NL-204ENST00000606752 CEP78Q5JTW2 689 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 TMEM244Q5VVB8 128 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 SFXN4Q6P4A7 337 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 NUFIP2Q7Z417 695 aaKnown RBP18.97■□□□□ 0.63
USP6NL-204ENST00000606752 P4HA3Q7Z4N8 544 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 SLC22A24Q8N4F4 322 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 ACOT12Q8WYK0 555 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 TMEM106AQ96A25 262 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 ORAI1Q96D31 301 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 WDFY2Q96P53 400 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 SH3GL3Q99963 347 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 SLC24A3Q9HC58 644 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 ABCB9Q9NP78 766 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 BRD7Q9NPI1 651 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 CLCF1Q9UBD9 225 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 LHX6Q9UPM6 363 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 SLC5A6Q9Y289 635 aa18.97■□□□□ 0.63
USP6NL-204ENST00000606752 NCOA6Q14686 2063 aaPredicted RBP18.96■□□□□ 0.63
USP6NL-204ENST00000606752 UBCP0CG48 685 aaKnown RBP18.96■□□□□ 0.63
USP6NL-204ENST00000606752 B4GALT1P15291 398 aa18.96■□□□□ 0.63
USP6NL-204ENST00000606752 PRKXP51817 358 aa18.96■□□□□ 0.63
USP6NL-204ENST00000606752 SPANXN2Q5MJ10 180 aa18.96■□□□□ 0.63
USP6NL-204ENST00000606752 ELFN2Q5R3F8 820 aa18.96■□□□□ 0.63
USP6NL-204ENST00000606752 IDNKQ5T6J7 187 aa18.96■□□□□ 0.63
USP6NL-204ENST00000606752 DDI2Q5TDH0 399 aa18.96■□□□□ 0.63
USP6NL-204ENST00000606752 MZT2AQ6P582 158 aa18.96■□□□□ 0.63
USP6NL-204ENST00000606752 SYT9Q86SS6 491 aa18.96■□□□□ 0.63
USP6NL-204ENST00000606752 ZNF100Q8IYN0 542 aa18.96■□□□□ 0.63
USP6NL-204ENST00000606752 ELMOD2Q8IZ81 293 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms