RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 LSM6P62312 80 aaKnown RBP14.34□□□□□ -0.11
SCAF1-204ENST00000601038 DGCR6Q14129 220 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 TMEM155Q4W5P6 130 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 GPR139Q6DWJ6 353 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 HACD2Q6Y1H2 254 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 Q6ZR03 302 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 BPIFB2Q8N4F0 458 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 KLHL36Q8N4N3 616 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 ZNF283Q8N7M2 679 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 OR2Z1Q8NG97 314 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 PTP4A1Q93096 173 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 DCLRE1CQ96SD1 692 aaKnown RBP14.34□□□□□ -0.11
SCAF1-204ENST00000601038 SLC6A7Q99884 636 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 PLA2G12AQ9BZM1 189 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 NRIP3Q9NQ35 241 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 IL19Q9UHD0 177 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 SIGLEC7Q9Y286 467 aa14.34□□□□□ -0.11
SCAF1-204ENST00000601038 POLR3KQ9Y2Y1 108 aaPredicted RBP14.34□□□□□ -0.11
SCAF1-204ENST00000601038 SLC16A7O60669 478 aa14.33□□□□□ -0.12
SCAF1-204ENST00000601038 KHDRBS3O75525 346 aaKnown RBP14.33□□□□□ -0.12
SCAF1-204ENST00000601038 H1F0P07305 194 aaKnown RBP14.33□□□□□ -0.12
SCAF1-204ENST00000601038 FPR2P25090 351 aa14.33□□□□□ -0.12
SCAF1-204ENST00000601038 KRR1Q13601 381 aaKnown RBP14.33□□□□□ -0.12
SCAF1-204ENST00000601038 LRRC28Q86X40 367 aaPredicted RBP14.33□□□□□ -0.12
SCAF1-204ENST00000601038 GLB1L2Q8IW92 636 aa14.33□□□□□ -0.12
SCAF1-204ENST00000601038 SPICQ8N5J4 248 aa14.33□□□□□ -0.12
SCAF1-204ENST00000601038 C3orf56Q8N813 242 aa14.33□□□□□ -0.12
SCAF1-204ENST00000601038 FAM162AQ96A26 154 aa14.33□□□□□ -0.12
SCAF1-204ENST00000601038 RASD2Q96D21 266 aa14.33□□□□□ -0.12
SCAF1-204ENST00000601038 FAM46AQ96IP4 442 aaKnown RBP14.33□□□□□ -0.12
SCAF1-204ENST00000601038 GPX7Q96SL4 187 aaPredicted RBP14.33□□□□□ -0.12
SCAF1-204ENST00000601038 SYT4Q9H2B2 425 aa14.33□□□□□ -0.12
SCAF1-204ENST00000601038 PATZ1Q9HBE1 687 aaKnown RBP14.33□□□□□ -0.12
SCAF1-204ENST00000601038 VSX1Q9NZR4 365 aaPredicted RBP14.33□□□□□ -0.12
SCAF1-204ENST00000601038 ASH2LQ9UBL3 628 aa14.33□□□□□ -0.12
SCAF1-204ENST00000601038 EGFL7Q9UHF1 273 aa14.33□□□□□ -0.12
SCAF1-204ENST00000601038 COA3Q9Y2R0 106 aaPredicted RBP14.33□□□□□ -0.12
SCAF1-204ENST00000601038 FAM32AQ9Y421 112 aaKnown RBP14.33□□□□□ -0.12
SCAF1-204ENST00000601038 OR6C6A6NF89 314 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 J3QW42 95 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 SURF4O15260 269 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 RAC2P15153 192 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 OMPP47874 163 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 HNRNPA0Q13151 305 aaKnown RBP14.32□□□□□ -0.12
SCAF1-204ENST00000601038 CCDC92Q53HC0 331 aaPredicted RBP14.32□□□□□ -0.12
SCAF1-204ENST00000601038 ADCK1Q86TW2 530 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 ZDHHC22Q8N966 263 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 OR1F12Q8NHA8 337 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 ITLN1Q8WWA0 313 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 SLC7A6Q92536 515 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 DVL3Q92997 716 aaPredicted RBP14.32□□□□□ -0.12
SCAF1-204ENST00000601038 POP5Q969H6 163 aaKnown RBP14.32□□□□□ -0.12
SCAF1-204ENST00000601038 SIGLEC11Q96RL6 698 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 KCTD14Q9BQ13 255 aaPredicted RBP14.32□□□□□ -0.12
SCAF1-204ENST00000601038 RERGLQ9H628 205 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 NTN4Q9HB63 628 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 NDUFAF4Q9P032 175 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 ATPIF1Q9UII2 106 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 RPS6KA6Q9UK32 745 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 PPP1R3CQ9UQK1 317 aa14.32□□□□□ -0.12
SCAF1-204ENST00000601038 NCK1P16333 377 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 RHCEP18577 417 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 SLC6A9P48067 706 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 RGS6P49758 472 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 BTG1P62324 171 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 KCNMB1Q16558 191 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 OTPQ5XKR4 325 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 C1orf94Q6P1W5 598 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 DPY19L2P2Q6ZN68 376 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 DEFB108BQ8NET1 73 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 OR5L1Q8NGL2 311 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 ZMYND19Q96E35 227 aaPredicted RBP14.31□□□□□ -0.12
SCAF1-204ENST00000601038 OR2V2Q96R30 315 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 NUAK2Q9H093 628 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 ESM1Q9NQ30 184 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 MMP26Q9NRE1 261 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 ABCD2Q9UBJ2 740 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 IER3IP1Q9Y5U9 82 aa14.31□□□□□ -0.12
SCAF1-204ENST00000601038 TRAPPC2LH3BP13 241 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 SOCS2O14508 198 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 IMPA2O14732 288 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 RER1O15258 196 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 TXNDC12O95881 172 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 RBMXP38159 391 aaKnown RBP14.3□□□□□ -0.12
SCAF1-204ENST00000601038 CDKN2AP42771 156 aaKnown RBP14.3□□□□□ -0.12
SCAF1-204ENST00000601038 NUDT2P50583 147 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 RPS6KA3P51812 740 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 FXYD6P3P58550 94 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 ZNF154Q13106 437 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 ZMYND11Q15326 602 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 TUSC1Q2TAM9 212 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 FGD3Q5JSP0 725 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 SLC27A4Q6P1M0 643 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 FBXW12Q6X9E4 464 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 PTCHD4Q6ZW05 846 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 C22orf15Q8WYQ4 148 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 RSRC1Q96IZ7 334 aaKnown RBP14.3□□□□□ -0.12
SCAF1-204ENST00000601038 C7orf34Q96L11 122 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 KRCC1Q9NPI7 259 aaPredicted RBP14.3□□□□□ -0.12
SCAF1-204ENST00000601038 DDX28Q9NUL7 540 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms