RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 AP3M1Q9Y2T2 418 aa14.84□□□□□ -0.03
SHKBP1-223ENST00000600552 NME4O00746 187 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 SPRY1O43609 319 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 KHDRBS3O75525 346 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 GPANK1O95872 356 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 IGHV2-70P01814 119 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 CD55P08174 381 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 DBHP09172 617 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 ZNF26P17031 533 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 TNFRSF1AP19438 455 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 GATA3P23771 443 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 GSK3BP49841 420 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 SEC61A1P61619 476 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 KRR1Q13601 381 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 HLXQ14774 488 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 ANKDD1AQ495B1 522 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 CBLL1Q75N03 491 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 ARPINQ7Z6K5 226 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 SPICQ8N5J4 248 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 ZDHHC22Q8N966 263 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 RP9Q8TA86 221 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 SYT4Q9H2B2 425 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 NMNAT1Q9HAN9 279 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 FAM32AQ9Y421 112 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 IER3IP1Q9Y5U9 82 aa14.83□□□□□ -0.04
SHKBP1-223ENST00000600552 IGHV3OR16-10A0A075B7F0 116 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 TRAPPC2LH3BP13 241 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 COX5BP10606 129 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 LIMS1P48059 325 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 ZMYND11Q15326 602 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 OR2T2Q6IF00 324 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 TMPRSS11FQ6ZWK6 438 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 OR52J3Q8NH60 311 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 OR1F12Q8NHA8 337 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 PTP4A1Q93096 173 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 SAMD8Q96LT4 415 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 OR2V2Q96R30 315 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 KCTD14Q9BQ13 255 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 AURKCQ9UQB9 309 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 TMEM5Q9Y2B1 443 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 AUP1Q9Y679 476 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 ENPP4Q9Y6X5 453 aa14.82□□□□□ -0.04
SHKBP1-223ENST00000600552 RER1O15258 196 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 SURF4O15260 269 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 ICMTO60725 284 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 DIRAS1O95057 198 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 NDUFB2O95178 105 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 H1F0P07305 194 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 KITLGP21583 273 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 NUDT2P50583 147 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 BTG1P62324 171 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 UBA52P62987 128 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 AQP6Q13520 282 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 MEP1BQ16820 701 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 CCDC92Q53HC0 331 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 GLB1L2Q8IW92 636 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 BCL6BQ8N143 479 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 OR10AD1Q8NGE0 317 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 ZNF420Q8TAQ5 688 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 SLC7A13Q8TCU3 470 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 HAVCR1Q96D42 359 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 RSRC1Q96IZ7 334 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 NUAK2Q9H093 628 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 EFCAB1Q9HAE3 211 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 PATZ1Q9HBE1 687 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 ZNF69Q9UC07 566 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 V9GYQ6 96 aa14.81□□□□□ -0.04
SHKBP1-223ENST00000600552 UNC119BA6NIH7 251 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 SLC6A9P48067 706 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 COMPP49747 757 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 PRSS12P56730 875 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 DBPQ10586 325 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 ZNF154Q13106 437 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 ESCO2Q56NI9 601 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 AWAT1Q58HT5 328 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 CORO6Q6QEF8 472 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 PTCHD4Q6ZW05 846 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 FAM122BQ7Z309 247 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 JAZF1Q86VZ6 243 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 LRRC28Q86X40 367 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 ZNF283Q8N7M2 679 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 BHLHE23Q8NDY6 225 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 DEFB108BQ8NET1 73 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 TSSK2Q96PF2 358 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 HOPXQ9BPY8 73 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 WACQ9BTA9 647 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 MRI1Q9BV20 369 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 WDR76Q9H967 626 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 NTN4Q9HB63 628 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 SRA1Q9HD15 236 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 OR5V1Q9UGF6 321 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 IL19Q9UHD0 177 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 PCDHGB1Q9Y5G3 927 aa14.8□□□□□ -0.04
SHKBP1-223ENST00000600552 TRBV4-1A0A0J9YWV2 114 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 H0YL77 283 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 SLC22A2O15244 555 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 AHCYL1O43865 530 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 PTP4A3O75365 173 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 PPP1R3DO95685 299 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 CYB5R3P00387 301 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms