RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PRR32B1ATL7 298 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 TMCC2O75069 709 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 ALOX5APP20292 161 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 PTAFRP25105 342 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 HTR5AP47898 357 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 PLP2Q04941 152 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 ELFN2Q5R3F8 820 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 SPATC1Q76KD6 591 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 ZNF295-AS1Q8N0V1 137 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 PAQR4Q8N4S7 273 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 SLC30A7Q8NEW0 376 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 OR1F12Q8NHA8 337 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 SLAMF6Q96DU3 332 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 POM121L2Q96KW2 1035 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 TTTY10Q9BZA0 68 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 SLC24A3Q9HC58 644 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 PKDREJQ9NTG1 2253 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 SNTNA6NMZ2 147 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 A6NNC1 897 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 USP9YO00507 2555 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 XPNPEP2O43895 674 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 PLAUP00749 431 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 STOMP27105 288 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 SLC15A1P46059 708 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 TMEM108Q6UXF1 575 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 ZNF454Q8N9F8 522 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 THEM6Q8WUY1 208 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 TBX5Q99593 518 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 HDHD2Q9H0R4 259 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 ESRP2Q9H6T0 727 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 MRPS18AQ9NVS2 196 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 FBXL3Q9UKT7 428 aa17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 EXOGQ9Y2C4 368 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 RPL36Q9Y3U8 105 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-222ENST00000600320 RTTNQ86VV8 2226 aa17.33■□□□□ 0.37
SHKBP1-222ENST00000600320 IGHV2OR16-5A0A0B4J2B6 119 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 A0A1W2PPR1 153 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 J3QRE1 110 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 ABCD4O14678 606 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 DENRO43583 198 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 ADRA2AP08913 450 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 DBHP09172 617 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 COX5BP10606 129 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 ZNF35P13682 527 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 ATP6V1E1P36543 226 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 POU4F2Q12837 409 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 RSPO1Q2MKA7 263 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 C6orf141Q5SZD1 244 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 ZNF787Q6DD87 383 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 ADAM5Q6NVV9 412 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 SSX6Q7RTT6 188 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 ALDH16A1Q8IZ83 802 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 OR10H4Q8NGA5 316 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 OR52I1Q8NGK6 324 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 COQ7Q99807 217 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 TMEM204Q9BSN7 226 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 CENPMQ9NSP4 180 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 UBAP1Q9NZ09 502 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 LAMP5Q9UJQ1 280 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 MYRFQ9Y2G1 1151 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 CADP27708 2225 aa17.33■□□□□ 0.36
SHKBP1-222ENST00000600320 FAM221AA4D161 298 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 ATP6V1G2-DDX39BF2Z307 99 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 PTHP01270 115 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 CD3EP07766 207 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 LYNP07948 512 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 APLNRP35414 380 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 GDI2P50395 445 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 NR1H2P55055 460 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 ZNF85Q03923 595 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 HGFACQ04756 655 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 KRTAP27-1Q3LI81 207 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 PIAS4Q8N2W9 510 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 BPIFB6Q8NFQ5 453 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 KBTBD8Q8NFY9 601 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 RNF133Q8WVZ7 376 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 GGHQ92820 318 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 NEUROG1Q92886 237 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 ATF6BQ99941 703 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 DDX28Q9NUL7 540 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 MAST4O15021 2626 aa17.32■□□□□ 0.36
SHKBP1-222ENST00000600320 A0A1W2PQL4 384 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 C5orf49A4QMS7 147 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 SHISA9B4DS77 424 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 ZNF878C9JN71 531 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 ZNF670-ZNF695F2Z2N8 137 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 PSMD9O00233 223 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 MAGEB4O15481 346 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 FAM20BO75063 409 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 OR2T7P0C7T2 308 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 CCNOP22674 350 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 CXCR4P61073 352 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 TBC1D28Q2M2D7 210 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 OR2T27Q8NH04 317 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 MNTQ99583 582 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 Q9H521 79 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 CDH20Q9HBT6 801 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 PLCXD1Q9NUJ7 323 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 SLCO1C1Q9NYB5 712 aa17.31■□□□□ 0.36
SHKBP1-222ENST00000600320 ATPIF1Q9UII2 106 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms