RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 SLC22A31A6NKX4 558 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 PCSK6P29122 969 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 SNRPGP62308 76 aaKnown RBP16.71■□□□□ 0.27
UPF1-209ENST00000600310 GALK2Q01415 458 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 SLC25A30Q5SVS4 291 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 ZNF544Q6NX49 715 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 PAMR1Q6UXH9 720 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 SHFQ7M4L6 423 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 OR6N2Q8NGY6 317 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 COQ7Q99807 217 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 ZNF442Q9H7R0 627 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 CA10Q9NS85 328 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 HAO2Q9NYQ3 351 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 EDARQ9UNE0 448 aa16.71■□□□□ 0.27
UPF1-209ENST00000600310 SELENOFO60613 162 aa16.7■□□□□ 0.26
UPF1-209ENST00000600310 ATP6V1G2O95670 118 aa16.7■□□□□ 0.26
UPF1-209ENST00000600310 CCNOP22674 350 aa16.7■□□□□ 0.26
UPF1-209ENST00000600310 SNTB2Q13425 540 aaKnown RBP16.7■□□□□ 0.26
UPF1-209ENST00000600310 GGTLC2Q14390 218 aa16.7■□□□□ 0.26
UPF1-209ENST00000600310 KRT80Q6KB66 452 aa16.7■□□□□ 0.26
UPF1-209ENST00000600310 TMEM154Q6P9G4 183 aa16.7■□□□□ 0.26
UPF1-209ENST00000600310 DPY19L4Q7Z388 723 aa16.7■□□□□ 0.26
UPF1-209ENST00000600310 DCXRQ7Z4W1 244 aa16.7■□□□□ 0.26
UPF1-209ENST00000600310 SMAP2Q8WU79 429 aaPredicted RBP16.7■□□□□ 0.26
UPF1-209ENST00000600310 ZNF582Q96NG8 517 aaPredicted RBP16.7■□□□□ 0.26
UPF1-209ENST00000600310 HEATR1Q9H583 2144 aaKnown RBP16.69■□□□□ 0.26
UPF1-209ENST00000600310 MPZL2O60487 215 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 ICMTO60725 284 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 DANCRP0C864 163 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 GABRB1P18505 474 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 HTR1FP30939 366 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 APOBEC3AP31941 199 aaPredicted RBP16.69■□□□□ 0.26
UPF1-209ENST00000600310 GLRXP35754 106 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 FABP6P51161 128 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 UCP2P55851 309 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 ECH1Q13011 328 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 TMED1Q13445 227 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 OCLNQ16625 522 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 KRTAP27-1Q3LI81 207 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 TTC23Q5W5X9 447 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 SLC16A9Q7RTY1 509 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 DHRSXQ8N5I4 330 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 ZNF454Q8N9F8 522 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 OR10S1Q8NGN2 331 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 RHOXF1Q8NHV9 184 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 ST7LQ8TDW4 575 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 DDX28Q9NUL7 540 aaKnown RBP16.69■□□□□ 0.26
UPF1-209ENST00000600310 DNAJC27Q9NZQ0 273 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 EIF3KQ9UBQ5 218 aaKnown RBP16.69■□□□□ 0.26
UPF1-209ENST00000600310 WARS2Q9UGM6 360 aaKnown RBP16.69■□□□□ 0.26
UPF1-209ENST00000600310 ST6GALNAC2Q9UJ37 374 aa16.69■□□□□ 0.26
UPF1-209ENST00000600310 ROS1P08922 2347 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 RAF1P04049 648 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 FAM157BP0CG42 384 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 TTKP33981 857 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 THBS4P35443 961 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 WNT5AP41221 380 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 NAA10P41227 235 aaPredicted RBP16.68■□□□□ 0.26
UPF1-209ENST00000600310 RAD52P43351 418 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 ADARB1P78563 741 aaKnown RBP16.68■□□□□ 0.26
UPF1-209ENST00000600310 EIF2B1Q14232 305 aaKnown RBP16.68■□□□□ 0.26
UPF1-209ENST00000600310 RSPO1Q2MKA7 263 aaPredicted RBP16.68■□□□□ 0.26
UPF1-209ENST00000600310 MEDAGQ5VYS4 303 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 VHLLQ6RSH7 139 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 ENTHD1Q8IYW4 607 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 OTOSQ8NHW6 89 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 TMEM171Q8WVE6 324 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 CYGBQ8WWM9 190 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 IPCEF1Q8WWN9 437 aaPredicted RBP16.68■□□□□ 0.26
UPF1-209ENST00000600310 IGFBPL1Q8WX77 278 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 SLC7A6Q92536 515 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 RFKQ969G6 155 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 C4orf45Q96LM5 186 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 DCLRE1CQ96SD1 692 aaKnown RBP16.68■□□□□ 0.26
UPF1-209ENST00000600310 ATF6BQ99941 703 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 APOL4Q9BPW4 351 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 ABHD6Q9BV23 337 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 ADI1Q9BV57 179 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 YIPF3Q9GZM5 350 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 FAIMQ9NVQ4 179 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 LRBAP50851 2863 aa16.68■□□□□ 0.26
UPF1-209ENST00000600310 RAI1Q7Z5J4 1906 aaPredicted RBP16.67■□□□□ 0.26
UPF1-209ENST00000600310 VSTM5A8MXK1 200 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 H0YAE9 185 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 H0YJX3 145 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 SMPD2O60906 423 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 ATE1O95260 518 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 SOD3P08294 240 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 DBHP09172 617 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 CD53P19397 219 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 ALOX5APP20292 161 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 RPS23P62266 143 aaKnown RBP16.67■□□□□ 0.26
UPF1-209ENST00000600310 ADIPOQQ15848 244 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 ARL9Q6T311 187 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 UNQ6126/PRO20091Q6UXV3 157 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 DTX2Q86UW9 622 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 ZNF101Q8IZC7 436 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 FBXL14Q8N1E6 418 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 NINJ1Q92982 152 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 SLAMF6Q96DU3 332 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms