RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MAD2L1BPQ15013 274 aaPredicted RBP16.35■□□□□ 0.21
CCDC9-205ENST00000600117 PABPC1L2AQ5JQF8 200 aa16.35■□□□□ 0.21
CCDC9-205ENST00000600117 NCMAPQ5T1S8 102 aa16.35■□□□□ 0.21
CCDC9-205ENST00000600117 LCN1P1Q5VSP4 162 aa16.35■□□□□ 0.21
CCDC9-205ENST00000600117 MEDAGQ5VYS4 303 aa16.35■□□□□ 0.21
CCDC9-205ENST00000600117 CORO6Q6QEF8 472 aa16.35■□□□□ 0.21
CCDC9-205ENST00000600117 ERI1Q8IV48 349 aaKnown RBP16.35■□□□□ 0.21
CCDC9-205ENST00000600117 MBD6Q96DN6 1003 aa16.35■□□□□ 0.21
CCDC9-205ENST00000600117 PLPPR2Q96GM1 343 aa16.35■□□□□ 0.21
CCDC9-205ENST00000600117 MS4A3Q96HJ5 214 aa16.35■□□□□ 0.21
CCDC9-205ENST00000600117 RASSF4Q9H2L5 321 aa16.35■□□□□ 0.21
CCDC9-205ENST00000600117 HAO2Q9NYQ3 351 aa16.35■□□□□ 0.21
CCDC9-205ENST00000600117 WARS2Q9UGM6 360 aaKnown RBP16.35■□□□□ 0.21
CCDC9-205ENST00000600117 PLEKHA6Q9Y2H5 1048 aa16.35■□□□□ 0.21
CCDC9-205ENST00000600117 CADP27708 2225 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 A6NNC1 897 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 ZNF593O00488 134 aaPredicted RBP16.34■□□□□ 0.21
CCDC9-205ENST00000600117 RER1O15258 196 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 WBP4O75554 376 aaKnown RBP16.34■□□□□ 0.21
CCDC9-205ENST00000600117 SERPINA5P05154 406 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 CD40P25942 277 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 IL5RAQ01344 420 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 BSPH1Q075Z2 132 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 SCRN3Q0VDG4 424 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 SNCBQ16143 134 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 CCDC92Q53HC0 331 aaPredicted RBP16.34■□□□□ 0.21
CCDC9-205ENST00000600117 ZNF774Q6NX45 483 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 CFAP77Q6ZQR2 320 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 SETD9Q8NE22 299 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 CPEB3Q8NE35 698 aaKnown RBP16.34■□□□□ 0.21
CCDC9-205ENST00000600117 OR6N2Q8NGY6 317 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 AKR7LQ8NHP1 331 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 FBLIM1Q8WUP2 373 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 HS3ST6Q96QI5 342 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 CLEC4MQ9H2X3 399 aaPredicted RBP16.34■□□□□ 0.21
CCDC9-205ENST00000600117 GDF2Q9UK05 429 aaPredicted RBP16.34■□□□□ 0.21
CCDC9-205ENST00000600117 FBXL3Q9UKT7 428 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 HSPE1-MOB4S4R3N1 261 aa16.34■□□□□ 0.21
CCDC9-205ENST00000600117 GOSR1O95249 250 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 SPARCP09486 303 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 PTAFRP25105 342 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 NAA10P41227 235 aaPredicted RBP16.33■□□□□ 0.2
CCDC9-205ENST00000600117 HSPA13P48723 471 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 SPOCK1Q08629 439 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 TMED1Q13445 227 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 TMEM108Q6UXF1 575 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 Q71RC1 249 aaPredicted RBP16.33■□□□□ 0.2
CCDC9-205ENST00000600117 VASH1Q7L8A9 365 aaPredicted RBP16.33■□□□□ 0.2
CCDC9-205ENST00000600117 DPY19L4Q7Z388 723 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 C8orf59Q8N0T1 100 aaPredicted RBP16.33■□□□□ 0.2
CCDC9-205ENST00000600117 OR10S1Q8NGN2 331 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 PIK3IP1Q96FE7 263 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 MAP6Q96JE9 813 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 MDFIQ99750 246 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 SMR3AQ99954 134 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 CDADC1Q9BWV3 514 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 ESRP2Q9H6T0 727 aaKnown RBP16.33■□□□□ 0.2
CCDC9-205ENST00000600117 ADGRL4Q9HBW9 690 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 PNRC2Q9NPJ4 139 aaKnown RBP16.33■□□□□ 0.2
CCDC9-205ENST00000600117 CLN6Q9NWW5 311 aa16.33■□□□□ 0.2
CCDC9-205ENST00000600117 SGCEO43556 437 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 MRPL3P09001 348 aaKnown RBP16.32■□□□□ 0.2
CCDC9-205ENST00000600117 APEX1P27695 318 aaKnown RBP16.32■□□□□ 0.2
CCDC9-205ENST00000600117 NR1H2P55055 460 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 NAAAQ02083 359 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 PLP2Q04941 152 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 SLC16A9Q7RTY1 509 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 CDC20BQ86Y33 519 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 GJC3Q8NFK1 279 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 OR2AJ1Q8NGZ0 328 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 CNIH3Q8TBE1 160 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 ST7LQ8TDW4 575 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 SMAP2Q8WU79 429 aaPredicted RBP16.32■□□□□ 0.2
CCDC9-205ENST00000600117 RFKQ969G6 155 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 C18orf12Q96KH6 178 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 TMEM204Q9BSN7 226 aa16.32■□□□□ 0.2
CCDC9-205ENST00000600117 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC9-205ENST00000600117 IGHV2OR16-5A0A0B4J2B6 119 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 OR6C6A6NF89 314 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 SYNGR3O43761 229 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 DOK2O60496 412 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 SBK2P0C263 348 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 COX5BP10606 129 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 CALCRP30988 508 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 NUDT6P53370 316 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 ZNF91Q05481 1191 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 RAB35Q15286 201 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 SMN1Q16637 294 aaKnown RBP16.31■□□□□ 0.2
CCDC9-205ENST00000600117 LAIR2Q6ISS4 152 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 SHFQ7M4L6 423 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 DCXRQ7Z4W1 244 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 OTOSQ8NHW6 89 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 POM121L2Q96KW2 1035 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 Q96MT0 163 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 AMELYQ99218 206 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 CNN2Q99439 309 aaKnown RBP16.31■□□□□ 0.2
CCDC9-205ENST00000600117 REPIN1Q9BWE0 567 aaKnown RBP16.31■□□□□ 0.2
CCDC9-205ENST00000600117 ANKRD60Q9BZ19 345 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 YIPF3Q9GZM5 350 aa16.31■□□□□ 0.2
CCDC9-205ENST00000600117 C1orf198Q9H425 327 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms