RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 PRRG3Q9BZD7 231 aa11.1□□□□□ -0.63
SH2D3A-208ENST00000599563 RACGAP1Q9H0H5 632 aa11.1□□□□□ -0.63
SH2D3A-208ENST00000599563 ZNF442Q9H7R0 627 aa11.1□□□□□ -0.63
SH2D3A-208ENST00000599563 CA10Q9NS85 328 aa11.1□□□□□ -0.63
SH2D3A-208ENST00000599563 GDF2Q9UK05 429 aaPredicted RBP11.1□□□□□ -0.63
SH2D3A-208ENST00000599563 FKBP7Q9Y680 259 aa11.1□□□□□ -0.63
SH2D3A-208ENST00000599563 ZNF503-AS2A6NEH8 195 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 RNF223E7ERA6 249 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 SSX4O60224 188 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 ENTPD6O75354 484 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 NR2C1P13056 603 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 SLC25A16P16260 332 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 MYF6P23409 242 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 SERPINF1P36955 418 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 CENPAP49450 140 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 SNRPGP62308 76 aaKnown RBP11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 TUBA1BP68363 451 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 TUBA4AP68366 448 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 EFNB3Q15768 340 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 GSG1Q2KHT4 349 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 UGT2A3Q6UWM9 527 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 Q71RC1 249 aaPredicted RBP11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 TUBA1AQ71U36 451 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 ZNF511Q8NB15 262 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 PROKR2Q8NFJ6 384 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 OR8J1Q8NGP2 316 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 RHOXF1Q8NHV9 184 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 FGFBP3Q8TAT2 258 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 ZMYND19Q96E35 227 aaPredicted RBP11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 FBXO17Q96EF6 278 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 ZNF582Q96NG8 517 aaPredicted RBP11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 APOL4Q9BPW4 351 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 TEX12Q9BXU0 123 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 MYOZ1Q9NP98 299 aaPredicted RBP11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 EMC7Q9NPA0 242 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 TMEM38BQ9NVV0 291 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 MRPL22Q9NWU5 206 aaKnown RBP11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 RAB26Q9ULW5 256 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 SPEF1Q9Y4P9 236 aa11.09□□□□□ -0.63
SH2D3A-208ENST00000599563 ABCA2Q9BZC7 2435 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 FN1P02751 2386 aaKnown RBP11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 AHCYL1O43865 530 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 NDUFS7O75251 213 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 GLCEO94923 617 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 UBL3O95164 117 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 APOL3O95236 402 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 FARS2O95363 451 aaKnown RBP11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 TFP02787 698 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 ERCC1P07992 297 aaPredicted RBP11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 MRPL3P09001 348 aaKnown RBP11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 PAICSP22234 425 aaKnown RBP11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 CRABP1P29762 137 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 GSTT1P30711 240 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 FMO3P31513 532 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 RPS27P42677 84 aaKnown RBP11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 HSPA13P48723 471 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 ZNF84P51523 738 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 IDH3GP51553 393 aaPredicted RBP11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 IL18R1Q13478 541 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 SWI5Q1ZZU3 235 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 NRN1LQ496H8 165 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 NXNL2Q5VZ03 156 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 DNM1P34Q6PK57 102 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 SHFQ7M4L6 423 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 MDP1Q86V88 176 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 C8orf59Q8N0T1 100 aaPredicted RBP11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 SLC26A10Q8NG04 563 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 OR6K6Q8NGW6 343 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 OR2T4Q8NH00 348 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 FNDC8Q8TC99 324 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 FBLIM1Q8WUP2 373 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 C11orf40Q8WZ69 217 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 CNBD2Q96M20 576 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 SH3GL3Q99963 347 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 ANKRD60Q9BZ19 345 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 SEC61A2Q9H9S3 476 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 NOX3Q9HBY0 568 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 POLE4Q9NR33 117 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 B3GNT2Q9NY97 397 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 ZNF224Q9NZL3 707 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 COMMD3-BMI1R4GMX3 469 aa11.08□□□□□ -0.64
SH2D3A-208ENST00000599563 ABCA1O95477 2261 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 NDUFS8O00217 210 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 PRODHO43272 600 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 SELENOFO60613 162 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 RAB36O95755 333 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 F12P00748 615 aaPredicted RBP11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 OR4A8P0C604 315 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 PATE4P0C8F1 98 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 OR8G3PP0DMU2 310 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 CD79AP11912 226 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 NPR2P20594 1047 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 LAP3P28838 519 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 NAA10P41227 235 aaPredicted RBP11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 PPOXP50336 477 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 RPS7P62081 194 aaKnown RBP11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 MRPS34P82930 218 aaKnown RBP11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 CDK5R2Q13319 367 aa11.07□□□□□ -0.64
SH2D3A-208ENST00000599563 ENDOGQ14249 297 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms