RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 LSSP48449 732 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 RIDAP52758 137 aaKnown RBP11.31□□□□□ -0.6
ZNF558-205ENST00000597304 SRSF5Q13243 272 aaKnown RBP11.31□□□□□ -0.6
ZNF558-205ENST00000597304 FAM109BQ6ICB4 259 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-205ENST00000597304 OR9A4Q8NGU2 314 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 PTX4Q96A99 478 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 CDC6Q99741 560 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 ACKR4Q9NPB9 350 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 LPAR3Q9UBY5 353 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 FAM96BQ9Y3D0 163 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 EFSO43281 561 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 S100A8P05109 93 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 S100A9P06702 114 aaKnown RBP11.31□□□□□ -0.6
ZNF558-205ENST00000597304 HPGDP15428 266 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 CX3CR1P49238 355 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 SNRPEP62304 92 aaKnown RBP11.31□□□□□ -0.6
ZNF558-205ENST00000597304 CYCSP99999 105 aaKnown RBP11.31□□□□□ -0.6
ZNF558-205ENST00000597304 CD226Q15762 336 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 SMAD2Q15796 467 aaKnown RBP11.31□□□□□ -0.6
ZNF558-205ENST00000597304 MST1LQ2TV78 715 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 ZNF260Q3ZCT1 412 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 OR52W1Q6IF63 320 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 KCTD18Q6PI47 426 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-205ENST00000597304 TMEM200AQ86VY9 491 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 CATSPERDQ86XM0 798 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 GVQW1Q8N7I0 195 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 ZSCAN4Q8NAM6 433 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-205ENST00000597304 OR13C3Q8NGS6 347 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 C16orf52Q8NHV5 167 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 PHOSPHO1Q8TCT1 267 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 HRH4Q9H3N8 390 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 RHOFQ9HBH0 211 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 WBP1LQ9NX94 342 aa11.31□□□□□ -0.6
ZNF558-205ENST00000597304 DBX1A6NMT0 343 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 TGFBR3LH3BV60 316 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 OIP5O43482 229 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 GNRH1P01148 92 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 FABP1P07148 127 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 ZNF806P0C7X5 589 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 CD37P11049 281 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 FOLR2P14207 255 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 MUC1P15941 1255 aaPredicted RBP11.3□□□□□ -0.6
ZNF558-205ENST00000597304 RAB6AP20340 208 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 HRH1P35367 487 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 POLR2GP62487 172 aaKnown RBP eCLIP11.3□□□□□ -0.6
ZNF558-205ENST00000597304 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.3□□□□□ -0.6
ZNF558-205ENST00000597304 ZNF776Q68DI1 518 aaPredicted RBP11.3□□□□□ -0.6
ZNF558-205ENST00000597304 CBLN3Q6UW01 205 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 OR6S1Q8NH40 331 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 NUDCD2Q8WVJ2 157 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 RRNAD1Q96FB5 475 aaKnown RBP11.3□□□□□ -0.6
ZNF558-205ENST00000597304 TWSG1Q9GZX9 223 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 RNF122Q9H9V4 155 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 GDF2Q9UK05 429 aaPredicted RBP11.3□□□□□ -0.6
ZNF558-205ENST00000597304 PCOLCE2Q9UKZ9 415 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 B9D1Q9UPM9 204 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 TBC1D3DA0A087WVF3 549 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 POM121BA6NF01 834 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 COLCA2A8K830 154 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 C2orf74A8MZ97 194 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 TBC1D3LB9A6J9 549 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 C11orf98E9PRG8 122 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 PLRG1O43660 514 aaKnown RBP11.3□□□□□ -0.6
ZNF558-205ENST00000597304 APBB3O95704 486 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 IFNA6P05013 189 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 TBC1D3HP0C7X1 549 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 MAOAP21397 527 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 CTNNB1P35222 781 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 ROM1Q03395 351 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 SKP2Q13309 424 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 EIF2B1Q14232 305 aaKnown RBP11.3□□□□□ -0.6
ZNF558-205ENST00000597304 HABP2Q14520 560 aaPredicted RBP11.3□□□□□ -0.6
ZNF558-205ENST00000597304 SLC22A6Q4U2R8 563 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 FAM209BQ5JX69 171 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 TBC1D3CQ6IPX1 549 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 ZNF585AQ6P3V2 769 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 MISPQ8IVT2 679 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 TBC1D3Q8IZP1 549 aaPredicted RBP11.3□□□□□ -0.6
ZNF558-205ENST00000597304 CHST4Q8NCG5 386 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 ZNF563Q8TA94 476 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 TCEAL3Q969E4 200 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 TAAR8Q969N4 342 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 ASB16Q96NS5 453 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 DGAT2Q96PD7 388 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 ZNF251Q9BRH9 671 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 RNF126Q9BV68 326 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 HHLA2Q9UM44 414 aa11.3□□□□□ -0.6
ZNF558-205ENST00000597304 MRPS33Q9Y291 106 aaKnown RBP11.3□□□□□ -0.6
ZNF558-205ENST00000597304 SFTA3P0C7M3 94 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 GJA4P35212 333 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 CAV2P51636 162 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 TAS2R31P59538 309 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 ECH1Q13011 328 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 IGSF11Q5DX21 431 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 AWAT2Q6E213 333 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 TMPPEQ6ZT21 453 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 SLC16A13Q7RTY0 426 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 NKAIN3Q8N8D7 197 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 OR4D6Q8NGJ1 314 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 METTL21AQ8WXB1 218 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms