RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 RNF148Q8N7C7 305 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 BPIFA2Q96DR5 249 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 NDEL1Q9GZM8 345 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 RYR2Q92736 4967 aa12.97□□□□□ -0.33
LIG1-214ENST00000597146 EFCAB9A8MZ26 197 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 MELTFP08582 738 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 PPIAL4GP0DN37 164 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 MPV17P39210 176 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 MNAT1P51948 309 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 UCP2P55851 309 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 PAX2Q02962 417 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 TAF11Q15544 211 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 ESCO2Q56NI9 601 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 SPATA46Q5T0L3 261 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 RUSC1-AS1Q66K80 236 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 TMEM53Q6P2H8 277 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 IPCEF1Q8WWN9 437 aaPredicted RBP12.96□□□□□ -0.33
LIG1-214ENST00000597146 TMEM54Q969K7 222 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 HSH2DQ96JZ2 352 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 RBP7Q96R05 134 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 SH3GL3Q99963 347 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 ZNF426Q9BUY5 554 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 RASSF4Q9H2L5 321 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 C20orf141Q9NUB4 165 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 NDE1Q9NXR1 346 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 TAGLN3Q9UI15 199 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 A4GNTQ9UNA3 340 aa12.96□□□□□ -0.33
LIG1-214ENST00000597146 C5orf63A6NC05 138 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 J3KTA2 159 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 DHHO43323 396 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 ACADSP16219 412 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 RPL4P36578 427 aaKnown RBP12.95□□□□□ -0.34
LIG1-214ENST00000597146 TOP3AQ13472 1001 aaPredicted RBP12.95□□□□□ -0.34
LIG1-214ENST00000597146 ZMYND11Q15326 602 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 ALG10Q5BKT4 473 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 FAM205BPQ63HN1 556 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 C16orf89Q6UX73 402 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 ZNF620Q6ZNG0 422 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 OAFQ86UD1 273 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 RNF113BQ8IZP6 322 aaKnown RBP12.95□□□□□ -0.34
LIG1-214ENST00000597146 OR1J1Q8NGS3 322 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 OR51A7Q8NH64 312 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 MOSPD2Q8NHP6 518 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 MCUR1Q96AQ8 359 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 CDRT15Q96T59 188 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 BCL2L14Q9BZR8 327 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 EGLN1Q9GZT9 426 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 KLHL21Q9UJP4 597 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 SAMD4AQ9UPU9 718 aaKnown RBP12.95□□□□□ -0.34
LIG1-214ENST00000597146 SNX13Q9Y5W8 968 aa12.95□□□□□ -0.34
LIG1-214ENST00000597146 PLSCR5A0PG75 271 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 DYNC1I1O14576 645 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 PIP5K1CO60331 668 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 SNAP29O95721 258 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 IGF2P01344 180 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 NR2C1P13056 603 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 CTXN1P60606 82 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 BTG1P62324 171 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 PLP2Q04941 152 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 CD47Q08722 323 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 SGCAQ16586 387 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 MOGQ16653 247 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 TBC1D28Q2M2D7 210 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 TMEM155Q4W5P6 130 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 FGD3Q5JSP0 725 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 SAMD4BQ5PRF9 694 aaKnown RBP12.94□□□□□ -0.34
LIG1-214ENST00000597146 NHLRC1Q6VVB1 395 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 PIGWQ7Z7B1 504 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 NRMQ8IXM6 262 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 SLC22A24Q8N4F4 322 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 CPEB3Q8NE35 698 aaKnown RBP12.94□□□□□ -0.34
LIG1-214ENST00000597146 ACOT11Q8WXI4 607 aaPredicted RBP12.94□□□□□ -0.34
LIG1-214ENST00000597146 LRMDAQ9H2I8 198 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 KRCC1Q9NPI7 259 aaPredicted RBP12.94□□□□□ -0.34
LIG1-214ENST00000597146 TMEM106BQ9NUM4 274 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 ENPP4Q9Y6X5 453 aa12.94□□□□□ -0.34
LIG1-214ENST00000597146 IGHV2-70DA0A0C4DH43 119 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 GPR137BO60478 399 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 TRMUO75648 421 aaKnown RBP12.93□□□□□ -0.34
LIG1-214ENST00000597146 PTHP01270 115 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 H1F0P07305 194 aaKnown RBP12.93□□□□□ -0.34
LIG1-214ENST00000597146 SMIM11AP58511 58 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 PRKCDQ05655 676 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 SLC36A2Q495M3 483 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 C8orf82Q6P1X6 216 aaPredicted RBP12.93□□□□□ -0.34
LIG1-214ENST00000597146 LRFN4Q6PJG9 635 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 BTNL3Q6UXE8 466 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 LRRN1Q6UXK5 716 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 SLC16A14Q7RTX9 510 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 DPPA2Q7Z7J5 298 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 OFCC1Q8IZS5 231 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 TMEM86BQ8N661 226 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 LIPHQ8WWY8 451 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 NSMAFQ92636 917 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 MCHR2Q969V1 340 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 ZNF347Q96SE7 839 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 TXNIPQ9H3M7 391 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 NMNAT1Q9HAN9 279 aaPredicted RBP12.93□□□□□ -0.34
LIG1-214ENST00000597146 MSL2Q9HCI7 577 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 CCNB1IP1Q9NPC3 277 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms