RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 C5orf63A6NC05 138 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 OR6C6A6NF89 314 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 A6NIZ1 184 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 SOCS2O14508 198 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 PLPP2O43688 288 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 SLC16A7O60669 478 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 VENTXO95231 258 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 TXNDC12O95881 172 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 ANPEPP15144 967 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 RHCEP18577 417 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 ZFP36P26651 326 aaKnown RBP8.87□□□□□ -0.99
LIG1-213ENST00000596672 RPL4P36578 427 aaKnown RBP8.87□□□□□ -0.99
LIG1-213ENST00000596672 GDI2P50395 445 aaKnown RBP8.87□□□□□ -0.99
LIG1-213ENST00000596672 ZNF81P51508 661 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 PRSS12P56730 875 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 RAP1BP61224 184 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 RAP1AP62834 184 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 HIST1H3AP68431 136 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 KRR1Q13601 381 aaKnown RBP8.87□□□□□ -0.99
LIG1-213ENST00000596672 HIST2H3PS2Q5TEC6 136 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 HIST2H3AQ71DI3 136 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 HDDC2Q7Z4H3 204 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 TMEM158Q8WZ71 300 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 TMEM186Q96B77 213 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 C4orf45Q96LM5 186 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 TRIM15Q9C019 465 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 ANKRD19PQ9H560 264 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 GORASP2Q9H8Y8 452 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 HIF1ANQ9NWT6 349 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 ACTR3BQ9P1U1 418 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 STX18Q9P2W9 335 aaKnown RBP8.87□□□□□ -0.99
LIG1-213ENST00000596672 LHFPL6Q9Y693 200 aa8.87□□□□□ -0.99
LIG1-213ENST00000596672 TCRBV3S1A0A5B6 114 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 UNC119BA6NIH7 251 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 B4DSR2 109 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 H3BNX3 289 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 RER1O15258 196 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 GMNNO75496 209 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 NDUFB2O95178 105 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 PPP1R3DO95685 299 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 PTHP01270 115 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 IGHV2-5P01817 119 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 TFP02787 698 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 ERCC1P07992 297 aaPredicted RBP8.86□□□□□ -0.99
LIG1-213ENST00000596672 MSMBP08118 114 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 ADH4P08319 380 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 ITGA2P17301 1181 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 HOXA4Q00056 320 aaPredicted RBP8.86□□□□□ -0.99
LIG1-213ENST00000596672 SLC34A1Q06495 639 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 CDK5R2Q13319 367 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 HLXQ14774 488 aaPredicted RBP8.86□□□□□ -0.99
LIG1-213ENST00000596672 KCNMB1Q16558 191 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 KRTAP27-1Q3LI81 207 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 ZNF718Q3SXZ3 478 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 ANKDD1AQ495B1 522 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 FGD3Q5JSP0 725 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 ZNF362Q5T0B9 420 aaPredicted RBP8.86□□□□□ -0.99
LIG1-213ENST00000596672 FAM205BPQ63HN1 556 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 LCN8Q6JVE9 175 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 TMEM154Q6P9G4 183 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 CORO6Q6QEF8 472 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 OR6V1Q8N148 313 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 PYURFQ96I23 114 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 ZNF570Q96NI8 536 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 SIGLEC11Q96RL6 698 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 REPIN1Q9BWE0 567 aaKnown RBP8.86□□□□□ -0.99
LIG1-213ENST00000596672 TMPRSS13Q9BYE2 586 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 MUC13Q9H3R2 512 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 FN3KQ9H479 309 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 ZNF665Q9H7R5 613 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 BATF3Q9NR55 127 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 VNN3Q9NY84 501 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 SLCO1C1Q9NYB5 712 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 ASH2LQ9UBL3 628 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 GRHPRQ9UBQ7 328 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 OPN4Q9UHM6 478 aa8.86□□□□□ -0.99
LIG1-213ENST00000596672 CMYA5Q8N3K9 4069 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 LOC105371242A0A075B767 164 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 AQP12BA6NM10 295 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 SGCEO43556 437 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 RGS9O75916 674 aaPredicted RBP8.85□□□□□ -0.99
LIG1-213ENST00000596672 CD55P08174 381 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 COX5BP10606 129 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 SDHAP31040 664 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 HTR5AP47898 357 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 GSSP48637 474 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 SEC61A1P61619 476 aaKnown RBP8.85□□□□□ -0.99
LIG1-213ENST00000596672 PPP1R8Q12972 351 aaKnown RBP8.85□□□□□ -0.99
LIG1-213ENST00000596672 PCGF3Q3KNV8 242 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 LYPD4Q6UWN0 246 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 SYT9Q86SS6 491 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 NAA40Q86UY6 237 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 AQP12AQ8IXF9 295 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 SEMA6DQ8NFY4 1073 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 OR8D4Q8NGM9 314 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 OR10S1Q8NGN2 331 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 CANT1Q8WVQ1 401 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 CCL17Q92583 94 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 SLCO4A1Q96BD0 722 aa8.85□□□□□ -0.99
LIG1-213ENST00000596672 CMBLQ96DG6 245 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms