RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 MT-ND5P03915 603 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 MSMBP08118 114 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 CD55P08174 381 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 DBHP09172 617 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 HIST1H1CP16403 213 aaKnown RBP11.07□□□□□ -0.64
LIG1-212ENST00000596549 SLC6A6P31641 620 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 MAGEA2P43356 314 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 HIST1H3AP68431 136 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 MXRA7P84157 204 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 KCNMB1Q16558 191 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 RFX4Q33E94 735 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 HIST2H3PS2Q5TEC6 136 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 C1orf94Q6P1W5 598 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 LEG1Q6P5S2 330 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 UNQ6126/PRO20091Q6UXV3 157 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 CYP2R1Q6VVX0 501 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 Q6ZR03 302 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 HIST2H3AQ71DI3 136 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 C1orf174Q8IYL3 243 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 OR6V1Q8N148 313 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 NPEPL1Q8NDH3 523 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 SDR9C7Q8NEX9 313 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 SLC26A10Q8NG04 563 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 MCUR1Q96AQ8 359 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 SAMD8Q96LT4 415 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 NMNAT3Q96T66 252 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 BTBD10Q9BSF8 475 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 TBCCD1Q9NVR7 557 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 DCAF16Q9NXF7 216 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 NDE1Q9NXR1 346 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 VNN3Q9NY84 501 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 CGGBP1Q9UFW8 167 aaPredicted RBP11.07□□□□□ -0.64
LIG1-212ENST00000596549 ATPIF1Q9UII2 106 aa11.07□□□□□ -0.64
LIG1-212ENST00000596549 TMEFF2Q9UIK5 374 aaPredicted RBP11.07□□□□□ -0.64
LIG1-212ENST00000596549 PLSCR5A0PG75 271 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 CLDN25C9JDP6 229 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 TPD52L2O43399 206 aaKnown RBP11.06□□□□□ -0.64
LIG1-212ENST00000596549 TIMM8AO60220 97 aaPredicted RBP11.06□□□□□ -0.64
LIG1-212ENST00000596549 THBS2P35442 1172 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 ARHGDIAP52565 204 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 SMIM11AP58511 58 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 MOGQ16653 247 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 SPATS1Q496A3 300 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 MTX3Q5HYI7 312 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 CORO6Q6QEF8 472 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 CFAP77Q6ZQR2 320 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.06□□□□□ -0.64
LIG1-212ENST00000596549 GLCCI1Q86VQ1 547 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 OR4C15Q8NGM1 316 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 OR8D4Q8NGM9 314 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 OR4K13Q8NH42 304 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 OR1F12Q8NHA8 337 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 TMEM186Q96B77 213 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 ELMOD3Q96FG2 381 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 PLA2G12AQ9BZM1 189 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 EGLN3Q9H6Z9 239 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 ZNF665Q9H7R5 613 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 RPRD1BQ9NQG5 326 aaKnown RBP11.06□□□□□ -0.64
LIG1-212ENST00000596549 CYSLTR2Q9NS75 346 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 DECR2Q9NUI1 292 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 ACTR3BQ9P1U1 418 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 PURGQ9UJV8 347 aaKnown RBP11.06□□□□□ -0.64
LIG1-212ENST00000596549 B9D1Q9UPM9 204 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 STARD10Q9Y365 291 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 COL6A5A8TX70 2615 aa11.06□□□□□ -0.64
LIG1-212ENST00000596549 OR6C68A6NDL8 312 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 IGHV2-5P01817 119 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 PSKH1P11801 424 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 GSTM3P21266 225 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 KITLGP21583 273 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 CRABP1P29762 137 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 TEKQ02763 1124 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 COX10Q12887 443 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 PPP1R8Q12972 351 aaKnown RBP11.05□□□□□ -0.64
LIG1-212ENST00000596549 TSPAN31Q12999 210 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 CDK5R2Q13319 367 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 HFEQ30201 348 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 ZNF770Q6IQ21 691 aaPredicted RBP11.05□□□□□ -0.64
LIG1-212ENST00000596549 LCN8Q6JVE9 175 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 DNM1P34Q6PK57 102 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 ZBTB46Q86UZ6 589 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 JAZF1Q86VZ6 243 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 LINC00346Q8IVM7 164 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 GNPDA2Q8TDQ7 276 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 TMEM158Q8WZ71 300 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 CCT8L2Q96SF2 557 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 IFT27Q9BW83 186 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 HDHD2Q9H0R4 259 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 G6PC2Q9NQR9 355 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 HIF1ANQ9NWT6 349 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 POLR1DQ9Y2S0 133 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 GRIP1Q9Y3R0 1128 aa11.05□□□□□ -0.64
LIG1-212ENST00000596549 B2RBV5 119 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 BHLHE40O14503 412 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 RENP00797 406 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 T-ENOLP0DO92 83 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 ANOS1P23352 680 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 LIPAP38571 399 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 HMGA2P52926 109 aa11.04□□□□□ -0.64
LIG1-212ENST00000596549 TNFAIP6P98066 277 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms