RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 CHMP1BQ7LBR1 199 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 UBE2J2Q8N2K1 259 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 Q8N402 240 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 OR6N1Q8NGY5 312 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 OTOSQ8NHW6 89 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 ACOT12Q8WYK0 555 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 SMIM19Q96E16 107 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 SOSTQ9BQB4 213 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 SLC22A4Q9H015 551 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 C11orf54Q9H0W9 315 aaPredicted RBP11.69□□□□□ -0.54
VRK3-205ENST00000593919 PPP1R3EQ9H7J1 279 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 B3GAT2Q9NPZ5 323 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 KCNG2Q9UJ96 466 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 LAMP5Q9UJQ1 280 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 RCE1Q9Y256 329 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 ZGRF1Q86YA3 2104 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 TPRP12270 2363 aaKnown RBP11.69□□□□□ -0.54
VRK3-205ENST00000593919 NBEAQ8NFP9 2946 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 RTTNQ86VV8 2226 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 IGKV3D-15A0A087WSY6 115 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 TRBV2A0A0J9YWF9 115 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 AQP7O14520 342 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 SC5DO75845 299 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 NR2C1P13056 603 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 SFXN4Q6P4A7 337 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 SLC25A47Q6Q0C1 308 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 GLB1L2Q8IW92 636 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 MS4A15Q8N5U1 240 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 DTX3Q8N9I9 347 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 TMEM54Q969K7 222 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 MRPL48Q96GC5 212 aaKnown RBP11.68□□□□□ -0.54
VRK3-205ENST00000593919 PRRG4Q9BZD6 226 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 PRDM14Q9GZV8 571 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 MMP28Q9H239 520 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 ZNF71Q9NQZ8 489 aaPredicted RBP11.68□□□□□ -0.54
VRK3-205ENST00000593919 KLHL9Q9P2J3 617 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 EXTL2Q9UBQ6 330 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 A0A1W2PPL8 197 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 SERPINA3P01011 423 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 SPARCP09486 303 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 FAM87AP0C7U9 286 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 ALOX5APP20292 161 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 LAP3P28838 519 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 CDAP32320 146 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 SLC25A35Q3KQZ1 300 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 METAP1DQ6UB28 335 aaPredicted RBP11.68□□□□□ -0.54
VRK3-205ENST00000593919 TPRA1Q86W33 373 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 C19orf18Q8NEA5 215 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 PNPLA2Q96AD5 504 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 MNTQ99583 582 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 PDCD1LG2Q9BQ51 273 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 TMEM14AQ9Y6G1 99 aa11.68□□□□□ -0.54
VRK3-205ENST00000593919 ITPR1Q14643 2758 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 A0A0G2JK05 382 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 A0A1B0GTH9 108 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 PLA2G10O15496 165 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 PAHP00439 452 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 HRGP04196 525 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 EIF4EP06730 217 aaKnown RBP11.67□□□□□ -0.54
VRK3-205ENST00000593919 RAB3BP20337 219 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 THBS2P35442 1172 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 AGAP6Q5VW22 663 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 RPL22L1Q6P5R6 122 aaKnown RBP11.67□□□□□ -0.54
VRK3-205ENST00000593919 AAED1Q7RTV5 226 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 C20orf196Q8IYI0 205 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 SAMD12Q8N8I0 201 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 THEM6Q8WUY1 208 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 ZCCHC14Q8WYQ9 949 aaKnown RBP11.67□□□□□ -0.54
VRK3-205ENST00000593919 OR14A2Q96R54 314 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 AMELYQ99218 206 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 SEC61A2Q9H9S3 476 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 CLEC4AQ9UMR7 237 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 INTS1Q8N201 2190 aaKnown RBP11.67□□□□□ -0.54
VRK3-205ENST00000593919 ATRXP46100 2492 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 A0A0G2JMP0 313 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 A0A0X1KG70 313 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 GPR171O14626 319 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 SLC43A1O75387 559 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 TGM6O95932 706 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 ZNF823P16415 610 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 ZNF133P52736 654 aaPredicted RBP11.67□□□□□ -0.54
VRK3-205ENST00000593919 RNPS1Q15287 305 aaKnown RBP11.67□□□□□ -0.54
VRK3-205ENST00000593919 C10orf128Q5T292 105 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 ZNF684Q5T5D7 378 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.67□□□□□ -0.54
VRK3-205ENST00000593919 SYT9Q86SS6 491 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 TUSC5Q8IXB3 177 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 OR4M2Q8NGB6 313 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 OR4M1Q8NGD0 313 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 TRMT10AQ8TBZ6 339 aaKnown RBP11.67□□□□□ -0.54
VRK3-205ENST00000593919 C11orf40Q8WZ69 217 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 TMEM45BQ96B21 275 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 SARAFQ96BY9 339 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 ALKBH3Q96Q83 286 aaPredicted RBP11.67□□□□□ -0.54
VRK3-205ENST00000593919 ULBP2Q9BZM5 246 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 BCO1Q9HAY6 547 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 EMC3Q9P0I2 261 aa11.67□□□□□ -0.54
VRK3-205ENST00000593919 NOSIPQ9Y314 301 aaKnown RBP11.67□□□□□ -0.54
VRK3-205ENST00000593919 MED19A0JLT2 244 aaPredicted RBP11.66□□□□□ -0.54
VRK3-205ENST00000593919 A6NIN4 97 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms