RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 ZNF101Q8IZC7 436 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 OR9Q1Q8NGQ5 310 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 OR1J1Q8NGS3 322 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 OR2AJ1Q8NGZ0 328 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 OR1F12Q8NHA8 337 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 IPCEF1Q8WWN9 437 aaPredicted RBP10.23□□□□□ -0.77
LIG3-213ENST00000590630 C4orf45Q96LM5 186 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 OSBPL10Q9BXB5 764 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 OR51B6Q9H340 312 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 ELOVL3Q9HB03 270 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 SLC25A19Q9HC21 320 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 DYNLRB1Q9NP97 96 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 KRT84Q9NSB2 600 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 MRPL22Q9NWU5 206 aaKnown RBP10.23□□□□□ -0.77
LIG3-213ENST00000590630 CYB5R1Q9UHQ9 305 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 GPR160Q9UJ42 338 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 OAZ3Q9UMX2 235 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 IGLV3-9A0A075B6K5 115 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 H3BNX3 289 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 H3BSA7 217 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 J3QW42 95 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 M0R233 179 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 SURF4O15260 269 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 SSX4O60224 188 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 F12P00748 615 aaPredicted RBP10.22□□□□□ -0.77
LIG3-213ENST00000590630 GYPBP06028 91 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 TUBG1P23258 451 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 CRISP1P54107 249 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 KLF3P57682 345 aaPredicted RBP10.22□□□□□ -0.77
LIG3-213ENST00000590630 ECH1Q13011 328 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 ELFN2Q5R3F8 820 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 CORO6Q6QEF8 472 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 DNM1P46Q6ZS02 220 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 ICA1LQ8NDH6 482 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 OR51L1Q8NGJ5 315 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 OR6K6Q8NGW6 343 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 ABHD4Q8TB40 342 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 SYNPRQ8TBG9 265 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 PLEKHA8Q96JA3 519 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 SORCS2Q96PQ0 1159 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 DCLRE1CQ96SD1 692 aaKnown RBP10.22□□□□□ -0.77
LIG3-213ENST00000590630 COQ7Q99807 217 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 VRK1Q99986 396 aaPredicted RBP10.22□□□□□ -0.77
LIG3-213ENST00000590630 SYT3Q9BQG1 590 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 PRRG3Q9BZD7 231 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 RAB1BQ9H0U4 201 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 SEMA6AQ9H2E6 1030 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 MS4A5Q9H3V2 200 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 DLL4Q9NR61 685 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 TUBG2Q9NRH3 451 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 TBCCD1Q9NVR7 557 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 DUSP13Q9UII6 198 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 FZR1Q9UM11 496 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 COMMD3-BMI1R4GMX3 469 aa10.22□□□□□ -0.77
LIG3-213ENST00000590630 NIPBLQ6KC79 2804 aaeCLIP10.21□□□□□ -0.77
LIG3-213ENST00000590630 A0A1W2PPW3 197 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 FAM183AA6NL82 134 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 PRR23D1E9PI22 279 aaPredicted RBP10.21□□□□□ -0.77
LIG3-213ENST00000590630 CSF3P09919 207 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 PRR23D2P0DMB1 279 aaPredicted RBP10.21□□□□□ -0.77
LIG3-213ENST00000590630 CLUP10909 449 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 IGFBP5P24593 272 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 RGS6P49758 472 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 ENTPD1P49961 510 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 DSCR9P59020 149 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 ERVS71-1P61550 626 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 PPP1CBP62140 327 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 PTGES3Q15185 160 aaKnown RBP10.21□□□□□ -0.77
LIG3-213ENST00000590630 MOGQ16653 247 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 PCK2Q16822 640 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 ZNF718Q3SXZ3 478 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 TEX30Q5JUR7 227 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 MBNL2Q5VZF2 373 aaKnown RBP10.21□□□□□ -0.77
LIG3-213ENST00000590630 CLEC2AQ6UVW9 174 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 CFAP77Q6ZQR2 320 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 RFPL4BQ6ZWI9 263 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 ZNF771Q7L3S4 317 aaPredicted RBP10.21□□□□□ -0.77
LIG3-213ENST00000590630 LRP11Q86VZ4 500 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 LINC00346Q8IVM7 164 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 ZNRF4Q8WWF5 429 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 PTP4A1Q93096 173 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 OTULINQ96BN8 352 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 MARS2Q96GW9 593 aaKnown RBP10.21□□□□□ -0.77
LIG3-213ENST00000590630 C18orf12Q96KH6 178 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 COG8Q96MW5 612 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 PITX2Q99697 317 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 ATF6BQ99941 703 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 HCAR1Q9BXC0 346 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 MYOZ1Q9NP98 299 aaPredicted RBP10.21□□□□□ -0.77
LIG3-213ENST00000590630 SLCO1C1Q9NYB5 712 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 GRIP1Q9Y3R0 1128 aa10.21□□□□□ -0.77
LIG3-213ENST00000590630 TRIM64A6NGJ6 449 aa10.2□□□□□ -0.78
LIG3-213ENST00000590630 TVP23AA6NH52 213 aa10.2□□□□□ -0.78
LIG3-213ENST00000590630 TRIM64BA6NI03 449 aa10.2□□□□□ -0.78
LIG3-213ENST00000590630 PRODHO43272 600 aa10.2□□□□□ -0.78
LIG3-213ENST00000590630 GLCEO94923 617 aa10.2□□□□□ -0.78
LIG3-213ENST00000590630 NGFP01138 241 aa10.2□□□□□ -0.78
LIG3-213ENST00000590630 IGHV3-13P01766 116 aa10.2□□□□□ -0.78
LIG3-213ENST00000590630 MT-ND5P03915 603 aa10.2□□□□□ -0.78
LIG3-213ENST00000590630 ADRA2AP08913 450 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms