RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZNHIT1O43257 154 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 ARL6IP5O75915 188 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 CST2P09228 141 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 UCHL1P09936 223 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 C1QTNF9P0C862 333 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 HSD11B1P28845 292 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 RORCP51449 518 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 MMP16P51512 607 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 HNRNPA0Q13151 305 aaKnown RBP10.03□□□□□ -0.8
SMAD4-205ENST00000588745 Q499Y3 187 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 ACSF3Q4G176 576 aaPredicted RBP10.03□□□□□ -0.8
SMAD4-205ENST00000588745 FAM27D1Q5T7N8 215 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 UNQ9370/PRO34162Q6UXP9 181 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 ZNF100Q8IYN0 542 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 LRRC18Q8N456 261 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 TEX19Q8NA77 164 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 GJC3Q8NFK1 279 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 OR5M9Q8NGP3 310 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 OR6Q1Q8NGQ2 317 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 ZFAND2BQ8WV99 257 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 PHYHIPQ92561 330 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 FAM122AQ96E09 287 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 BARHL1Q9BZE3 327 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 C6orf62Q9GZU0 229 aaPredicted RBP10.03□□□□□ -0.8
SMAD4-205ENST00000588745 PPIL3Q9H2H8 161 aaKnown RBP10.03□□□□□ -0.8
SMAD4-205ENST00000588745 MOB1AQ9H8S9 216 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 G6PC2Q9NQR9 355 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 DDX28Q9NUL7 540 aaKnown RBP10.03□□□□□ -0.8
SMAD4-205ENST00000588745 SLC22A13Q9Y226 551 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 EMC9Q9Y3B6 208 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 SPENQ96T58 3664 aaKnown RBP10.03□□□□□ -0.8
SMAD4-205ENST00000588745 CACNA1GO43497 2377 aa10.03□□□□□ -0.8
SMAD4-205ENST00000588745 PHF3Q92576 2039 aaKnown RBP10.02□□□□□ -0.8
SMAD4-205ENST00000588745 IQCMA0A1B0GVH7 501 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 TMEM269A0A1B0GVZ9 245 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 ZNF879B4DU55 563 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 INHBBP09529 407 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 MAPK3P27361 379 aaPredicted RBP10.02□□□□□ -0.8
SMAD4-205ENST00000588745 PLA2G5P39877 138 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 GRB2P62993 217 aaKnown RBP10.02□□□□□ -0.8
SMAD4-205ENST00000588745 SCRN3Q0VDG4 424 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 TAF13Q15543 124 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 MOGQ16653 247 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 HSD17B12Q53GQ0 312 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 UNQ6494/PRO21346Q6UXR6 183 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 ZNF813Q6ZN06 617 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 FGD2Q7Z6J4 655 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 SLC22A24Q8N4F4 322 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 GPR148Q8TDV2 347 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 THRSPQ92748 146 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 WNT2BQ93097 391 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 FBXO17Q96EF6 278 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 DERL3Q96Q80 235 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 SH3GL3Q99963 347 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 TPK1Q9H3S4 243 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 SMURF1Q9HCE7 757 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 ZNF71Q9NQZ8 489 aaPredicted RBP10.02□□□□□ -0.8
SMAD4-205ENST00000588745 FAM206AQ9NX38 181 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 UPB1Q9UBR1 384 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 MALT1Q9UDY8 824 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 OR52A1Q9UKL2 312 aa10.02□□□□□ -0.8
SMAD4-205ENST00000588745 CACNA1CQ13936 2221 aa10.02□□□□□ -0.81
SMAD4-205ENST00000588745 ARHGAP21Q5T5U3 1957 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ARPC4-TTLL3A0A0A6YYG9 625 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 TRAV1-2A0A0B4J238 106 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 SMIM30A4D0T7 59 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ACOD1A6NK06 481 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 AHRRA9YTQ3 701 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 TAF4O00268 1085 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 PIN1P1O15428 100 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 FARS2O95363 451 aaKnown RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 OCM2P0CE71 109 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 UBCP0CG48 685 aaKnown RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ACHEP22303 614 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 OR3A2P47893 321 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ARF1P84077 181 aaKnown RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 RAB35Q15286 201 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 GUSBP1Q15486 140 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ODF4Q2M2E3 257 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 LINC00303Q3SY05 128 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 CCDC92Q53HC0 331 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 KRTCAP3Q53RY4 240 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ELFN2Q5R3F8 820 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 BCL2L15Q5TBC7 163 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ZNF324BQ6AW86 544 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ZNF704Q6ZNC4 412 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ZNF627Q7L945 461 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 SLC16A14Q7RTX9 510 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ABHD12BQ7Z5M8 362 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 SYT9Q86SS6 491 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 TPRA1Q86W33 373 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 Q8NA96 180 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 OR10AC1Q8NH08 325 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 TSEN15Q8WW01 171 aaKnown RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ZCCHC14Q8WYQ9 949 aaKnown RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 AP3S1Q92572 193 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 KCNJ15Q99712 375 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ATF6BQ99941 703 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 WACQ9BTA9 647 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 HDHD2Q9H0R4 259 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms