RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 GPR107Q5VW38 600 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 LIPKQ5VXJ0 399 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 ANKRD16Q6P6B7 361 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 ZNF474Q6S9Z5 364 aaPredicted RBP9.89□□□□□ -0.83
VMP1-207ENST00000588131 TUBA1AQ71U36 451 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 KCTD20Q7Z5Y7 419 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 CLVS1Q8IUQ0 354 aaPredicted RBP9.89□□□□□ -0.83
VMP1-207ENST00000588131 LIX1LQ8IVB5 337 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 PHC2Q8IXK0 858 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 ZNF433Q8N7K0 673 aaPredicted RBP9.89□□□□□ -0.83
VMP1-207ENST00000588131 GJC3Q8NFK1 279 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 UFD1Q92890 307 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 FUNDC2Q9BWH2 189 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 MROQ9BYG7 248 aa9.89□□□□□ -0.83
VMP1-207ENST00000588131 TLN1Q9Y490 2541 aaKnown RBP9.89□□□□□ -0.83
VMP1-207ENST00000588131 USP24Q9UPU5 2620 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 ZGRF1Q86YA3 2104 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 DSPP15924 2871 aaKnown RBP9.88□□□□□ -0.83
VMP1-207ENST00000588131 ZNF878C9JN71 531 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 OGG1O15527 345 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 SRSF10O75494 262 aaKnown RBP9.88□□□□□ -0.83
VMP1-207ENST00000588131 PNPP00491 289 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 HLA-HP01893 362 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 TACSTD2P09758 323 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 CELP19835 753 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 BMP5P22003 454 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 NR4A1P22736 598 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 GADD45AP24522 165 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 TTKP33981 857 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 OPRM1P35372 400 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 RIDAP52758 137 aaKnown RBP9.88□□□□□ -0.83
VMP1-207ENST00000588131 RPS25P62851 125 aaKnown RBP9.88□□□□□ -0.83
VMP1-207ENST00000588131 PSG4Q00888 419 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 BDH1Q02338 343 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 MFGE8Q08431 387 aaPredicted RBP9.88□□□□□ -0.83
VMP1-207ENST00000588131 SCRN3Q0VDG4 424 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 CDK5R1Q15078 307 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 GABRA6Q16445 453 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 TBRG1Q3YBR2 411 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 ELFN2Q5R3F8 820 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 TMEM211Q6ICI0 200 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 ZNF774Q6NX45 483 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 ARL9Q6T311 187 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 SLC16A12Q6ZSM3 486 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 BEND4Q6ZU67 534 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 SYT9Q86SS6 491 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 LUZP2Q86TE4 346 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 CXorf67Q86X51 503 aaPredicted RBP9.88□□□□□ -0.83
VMP1-207ENST00000588131 RELL2Q8NC24 303 aaPredicted RBP9.88□□□□□ -0.83
VMP1-207ENST00000588131 AKR7LQ8NHP1 331 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 MYCBPQ99417 103 aaPredicted RBP9.88□□□□□ -0.83
VMP1-207ENST00000588131 OR2H1Q9GZK4 316 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 WNT5BQ9H1J7 359 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 KCNN2Q9H2S1 579 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 DDX28Q9NUL7 540 aaKnown RBP9.88□□□□□ -0.83
VMP1-207ENST00000588131 NDUFB11Q9NX14 153 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 SLC5A6Q9Y289 635 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 SF3B6Q9Y3B4 125 aaKnown RBP9.88□□□□□ -0.83
VMP1-207ENST00000588131 ITPR1Q14643 2758 aa9.88□□□□□ -0.83
VMP1-207ENST00000588131 SMIM31A0A1B0GVY4 71 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 CIB4A0PJX0 185 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 CCL21O00585 134 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 SGCEO43556 437 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 SYNGR3O43761 229 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 DOK2O60496 412 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 ZNF254O75437 659 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 PRB1P04280 392 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 ANOS1P23352 680 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 KIR3DL2P43630 455 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 CAPZA2P47755 286 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 TGM4P49221 684 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 TAS2R43P59537 309 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 PCBD1P61457 104 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 SLC3A1Q07837 685 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 RAB35Q15286 201 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 TAF13Q15543 124 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 RSPO1Q2MKA7 263 aaPredicted RBP9.87□□□□□ -0.83
VMP1-207ENST00000588131 SLC36A2Q495M3 483 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 PABPC1L2AQ5JQF8 200 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 WDR38Q5JTN6 314 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 DMKNQ6E0U4 476 aaPredicted RBP9.87□□□□□ -0.83
VMP1-207ENST00000588131 RPL22L1Q6P5R6 122 aaKnown RBP9.87□□□□□ -0.83
VMP1-207ENST00000588131 DEGS2Q6QHC5 323 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 EGFL6Q8IUX8 553 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 PRSS35Q8N3Z0 413 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 RPS4Y2Q8TD47 263 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 SLC7A6Q92536 515 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 RND1Q92730 232 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 RPL3LQ92901 407 aaKnown RBP9.87□□□□□ -0.83
VMP1-207ENST00000588131 PPP1R14AQ96A00 147 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 PGLYRP3Q96LB9 341 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 C4orf45Q96LM5 186 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 ATF6BQ99941 703 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 OR51E2Q9H255 320 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 PIGMQ9H3S5 423 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 RNF121Q9H920 327 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 PLEK2Q9NYT0 353 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 FRRS1LQ9P0K9 344 aa9.87□□□□□ -0.83
VMP1-207ENST00000588131 ZNF629Q9UEG4 869 aaPredicted RBP9.87□□□□□ -0.83
VMP1-207ENST00000588131 ENPP5Q9UJA9 477 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms