RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 TMEM106BQ9NUM4 274 aa13.1□□□□□ -0.31
TRAPPC6A-204ENST00000588062 TMEM5Q9Y2B1 443 aa13.1□□□□□ -0.31
TRAPPC6A-204ENST00000588062 COA3Q9Y2R0 106 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC6A-204ENST00000588062 A0A1W2PRQ8 180 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 TRIM77I1YAP6 450 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 NDUFB2O95178 105 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 SBK2P0C263 348 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 NCK1P16333 377 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 SDHAP31040 664 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 OMPP47874 163 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 LSM6P62312 80 aaKnown RBP13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 ACTG1P63261 375 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 AQP6Q13520 282 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 KRR1Q13601 381 aaKnown RBP13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 DGCR6Q14129 220 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 CCDC92Q53HC0 331 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 PTCHD4Q6ZW05 846 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 RRM2BQ7LG56 351 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 LRRC28Q86X40 367 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 ZDHHC22Q8N966 263 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 DEFB108BQ8NET1 73 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 OR2Z1Q8NG97 314 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 DVL3Q92997 716 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 PTP4A1Q93096 173 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 C7orf34Q96L11 122 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 SIGLEC11Q96RL6 698 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 JMJD8Q96S16 334 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 SLC6A7Q99884 636 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 SUCNR1Q9BXA5 334 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 PLA2G12AQ9BZM1 189 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 SYT4Q9H2B2 425 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 MMP26Q9NRE1 261 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 PLEK2Q9NYT0 353 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 VSX1Q9NZR4 365 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 NDUFAF4Q9P032 175 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 ABCD2Q9UBJ2 740 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 EGFL7Q9UHF1 273 aa13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 POLR3KQ9Y2Y1 108 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC6A-204ENST00000588062 SLC16A7O60669 478 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 KHDRBS3O75525 346 aaKnown RBP13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 FOXH1O75593 365 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 H1F0P07305 194 aaKnown RBP13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 DBHP09172 617 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 TNFRSF1AP19438 455 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 SEC23BQ15437 767 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 KCNMB1Q16558 191 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 TMEM155Q4W5P6 130 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 GPR139Q6DWJ6 353 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 CYP4Z1Q86W10 505 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 GLB1L2Q8IW92 636 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 OR1F12Q8NHA8 337 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 ST7LQ8TDW4 575 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 ITLN1Q8WWA0 313 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 GCDHQ92947 438 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 GPA33Q99795 319 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 NUAK2Q9H093 628 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 PATZ1Q9HBE1 687 aaKnown RBP13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 ASH2LQ9UBL3 628 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 IL19Q9UHD0 177 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 IL20RAQ9UHF4 553 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 IER3IP1Q9Y5U9 82 aa13.08□□□□□ -0.32
TRAPPC6A-204ENST00000588062 TRBV4-1A0A0J9YWV2 114 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 TRAPPC2LH3BP13 241 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 DCTN6O00399 190 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 RER1O15258 196 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 CCDC22O60826 627 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 TXNDC12O95881 172 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 RAC2P15153 192 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 RHCEP18577 417 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 TNFSF4P23510 183 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 CDKN2AP42771 156 aaKnown RBP13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 SLC6A9P48067 706 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 SEC61A1P61619 476 aaKnown RBP13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 ZMYND11Q15326 602 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 C1orf94Q6P1W5 598 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 FBXW12Q6X9E4 464 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 FAM86B1Q8N7N1 296 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 C22orf15Q8WYQ4 148 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 FAM162AQ96A26 154 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 DHRS1Q96LJ7 313 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 KCTD14Q9BQ13 255 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 FUZQ9BT04 418 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 RERGLQ9H628 205 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 ATPIF1Q9UII2 106 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 RPS6KA6Q9UK32 745 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 PPP1R3CQ9UQK1 317 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 MEGF8Q7Z7M0 2845 aa13.07□□□□□ -0.32
TRAPPC6A-204ENST00000588062 F5H0A9 414 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC6A-204ENST00000588062 SOCS2O14508 198 aa13.06□□□□□ -0.32
TRAPPC6A-204ENST00000588062 NDUFAB1O14561 156 aa13.06□□□□□ -0.32
TRAPPC6A-204ENST00000588062 GPANK1O95872 356 aa13.06□□□□□ -0.32
TRAPPC6A-204ENST00000588062 MDH1P40925 334 aaKnown RBP13.06□□□□□ -0.32
TRAPPC6A-204ENST00000588062 NUDT2P50583 147 aa13.06□□□□□ -0.32
TRAPPC6A-204ENST00000588062 PSME3P61289 254 aa13.06□□□□□ -0.32
TRAPPC6A-204ENST00000588062 BTG1P62324 171 aa13.06□□□□□ -0.32
TRAPPC6A-204ENST00000588062 HIST1H3AP68431 136 aa13.06□□□□□ -0.32
TRAPPC6A-204ENST00000588062 HLXQ14774 488 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC6A-204ENST00000588062 RSPO1Q2MKA7 263 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC6A-204ENST00000588062 HIST2H3PS2Q5TEC6 136 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms